Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi568g00001 ATGCAGCATAGGAAAATTGTTAGGTTACAGGATGTAGTGCACAGTGAGAAGCGATTGTATCTGGTTTTCGAGTATCTGGACTTAGATCTGAAGAAGCATATGGATTCATCTCCCGAGTTCATAAAAGATCCTCGACAAGTAAAAATGTTCCTTTATCAAATGCTCTGTGGAATTGCTTACTGTCATTCACATAGAGTTCTTCACCGAGACTTGAAACCACAGAATTTGTTGATAGATCGCCGTACTAATTCTCTAAAGCTTGCAGATTTTGGATTGGCCAGGGCATTTGGCATTCCTGTCAGAACATTTACACATGAGGTAGTTACACTGTGGTACCGAGCTCCAGAAATATTGCTTGGATCTCGTCATTATTCAACTCCAGTCGATGTTTGGTCAGTGGGATGTATATTTGCAGAGATGTCAAACCGACTATCTCTATTCCCCGGGGATTCAGAGATTGACGAATTGTTTAAAATATTCAGAATCTTGGGCACCCCAAACGAAGGTACATGGCCAGGAGTAACTTCATTGCCTGATTTTAAATCAACATTTCCCAGGTGGCCAGCTAAGGACCTAGCGGCCGTGGTTCCAAATCTTGAGCCAGCTGGTCTTGATCTTATTTCTAGCATGCTTTGTTTGGACCCCAGCAAAAGAATCACCGCCAGGAGCGCAGTGGAACATGAATACTTCAAAGACATTAAATTTGTACCCTAA 714 0.423 MQHRKIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFIKDPRQVKMFLYQMLCGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMSNRLSLFPGDSEIDELFKIFRILGTPNEGTWPGVTSLPDFKSTFPRWPAKDLAAVVPNLEPAGLDLISSMLCLDPSKRITARSAVEHEYFKDIKFVP 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi568g00001 237 FunFam Cell division control protein 2 homolog 29 235 - -
Vivi568g00001 237 SUPERFAMILY Protein kinase-like (PK-like) 2 233 IPR011009 -
Vivi568g00001 237 Gene3D Phosphorylase Kinase; domain 1 1 27 - -
Vivi568g00001 237 ProSitePatterns Serine/Threonine protein kinases active-site signature. 66 78 IPR008271 GO:0004672|GO:0006468
Vivi568g00001 237 SMART serkin_6 2 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi568g00001 237 ProSiteProfiles Protein kinase domain profile. 1 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi568g00001 237 Pfam Protein kinase domain 1 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi568g00001 237 PANTHER CELL DIVISION PROTEIN KINASE 2 230 - -
Vivi568g00001 237 Gene3D Transferase(Phosphotransferase) domain 1 29 235 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi568g00001 1 237 Core Cell Cycle Gene Families AT3G48750 78.903 1.18e-142 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Vivi568g00001 Pkinase 6.4e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi568g00001 K02206 - gmx:100780359 463.381