Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi566g00044 ATGGCTTATTCCAAACTTCTCTTTTTCTATATCCTTGTTAGTATTTTCCTCTATTTTGCAACTATCAAGGCACAAAACTCTCCATTTTTTCTGTATAGAAACTGTTCCACCAACCTTACCACAACCAGCAGCCTCTTCGAAACCAATCTCAGGACCTTACTCTCTTCATTTTCTTCAAAAGCCACCGGAAACATTGAATTCTTCAACACCACCATCCCTGCTATAAACCCTTCAGATTCTGTATATGGATTGTTCATGTGCAGAGGGGATGTACCCTCTCTGGTCTGTCATGAATGTATACATGATGCAATACAGCAGCTATCCTCACAGTGTTCTTTCTCCAAACAAGCTGTGATTTGGTACAACGAATGCATGCTTCGATACTCCGACAACTACTTCTTTTCATCCGTTGATAAGTCTGGTTTTTCCTTGACCAATACGGCCGATGTCTCAAACACGAAAACCTTCGTCCCTCTATTGTCTTCATTCATGAATCAAACTGCAGATGAAGCAGCAAGTCCACCTTCCGGCGACAAGAACAAGAAGTTTGCCACAAATGAAACACGAGTTTCTGAATTCGAGACACTTTACTGTCTAGCTCAGTGCACGCCGGACTTGTCCCCCAATGATTGCAGAACCTGTCTCAGCAGTGCTATTGAGGAACTTCCAACATGCTGTAATGGGAAGGTGGGTGGAAGATATCTTAATCCTAGCTGTAATGTTAGGTATGAACTATATCCTTTTTATAGGTCTAATGATGTGACTTCACCAAATCACCTTGCTCCTCAAACAAATGATTCAAAACTAGATGATAGATTTTCCCAAAATCCATTTTATCTTTCATATAATTGCTCAAGTAACCACAATACAATCTCTGAGAAAAGCTTCAGATTACTTCTCTCTGATTTATCGTCCAACGCCGCAAGTGGCAAAACATTTCACACTAATGTATCTGACTTAGTGTATGGCCTTTTCATGTGTCGAGGCGACCTTCCATCCCGCCTCTGTGCTTCATGTGTGACAAACGCAGCGGATAAAATATACTCGAAGTGTCTTTCTTTCTCAGAGGGTATAATTTGGTACAGCCATTGCTTGGTTCGATATTCAAATCGGTATTTTGTCCCTAGCATGGAAACAATTCCTATGTACCGCGATATAAACATCACTAATCATTCTACCCCGGACCAAAACTTGTTCGCGAGTACATTATCGAACCAGCTATCTGAACTTGCAAATAAGACAGGAAACAGTGATGGAAAATACATGACAAATTCATTAAAATTGAATGATAAACAAACCTTGTATACTCTTGAACAATGTCAACCAAATTTGTCTAATCAGGAGTGCATTTCATGTCTAAATGATGTGATAAGTAGAGCAGTTCCATGGTCACTTTTGGGAAGTGTTGGGGGAAGAGTTATATATCCTAGCTGCAATCTCAGGTTTGAATTGTTCCAATTTTACATGGAGGCCGGAGACGAAGATCAGCCTTCTACGAGAAATGCAGAGAAACGGACAATTATCTTCATTGTTGTCTCAATCATTATTTTGGTGATACTTTTTTCTGTTGGCTACTACTTGCTAAAGAGAAGGGGAAGGAAGAGTCGTAGGACTATTCTTCGAGAAAATTTTGGTGAAGAAAGTGCTATTGTAGAACCACTACAATTCGATTGGATGGTAATTCAAGCAGCAACAAACAACTTTTCTATTGACAATTACATTGGCAAAGGTGGTTTTGGAGAGGTTTACAAGGGTGTTCTTTCTGATGGTCGAGAAGTAGCTATAAAAAGACTTTCTGAAAGTTCTAAACAAGGTGTGGAGGAGTTCAAGAATGAAGTATTACTGATAGCCAAACTTCAACATAGAAATTTAGTGACATTTATTGGATTTTGCCTTGAAGAACACGAGAAAATACTTATTTATGAATTTGTGCCCAACAAAAGTCTAGATTACATTTTATTTGATTCTGAACAGAAAAAGTTGTTAACATGGATTGAACGCTTTAACATCATAGGAGGAATTGCTCGAGGAATTCTATATTTGCACGAGCACTCTCGACTGAAAGTTATACATCGGGATCTCAAGCCTAGCAATATTCTATTAGATGAAAATATGATTCCTAAAATTTCTGATTTTGGATTGGCTCGAATTGTTGAAATAAGTCAAGATGAAAGAAGTACAAAGAGAATTGTCGGAACATAA 2202 0.3856 MAYSKLLFFYILVSIFLYFATIKAQNSPFFLYRNCSTNLTTTSSLFETNLRTLLSSFSSKATGNIEFFNTTIPAINPSDSVYGLFMCRGDVPSLVCHECIHDAIQQLSSQCSFSKQAVIWYNECMLRYSDNYFFSSVDKSGFSLTNTADVSNTKTFVPLLSSFMNQTADEAASPPSGDKNKKFATNETRVSEFETLYCLAQCTPDLSPNDCRTCLSSAIEELPTCCNGKVGGRYLNPSCNVRYELYPFYRSNDVTSPNHLAPQTNDSKLDDRFSQNPFYLSYNCSSNHNTISEKSFRLLLSDLSSNAASGKTFHTNVSDLVYGLFMCRGDLPSRLCASCVTNAADKIYSKCLSFSEGIIWYSHCLVRYSNRYFVPSMETIPMYRDINITNHSTPDQNLFASTLSNQLSELANKTGNSDGKYMTNSLKLNDKQTLYTLEQCQPNLSNQECISCLNDVISRAVPWSLLGSVGGRVIYPSCNLRFELFQFYMEAGDEDQPSTRNAEKRTIIFIVVSIIILVILFSVGYYLLKRRGRKSRRTILRENFGEESAIVEPLQFDWMVIQAATNNFSIDNYIGKGGFGEVYKGVLSDGREVAIKRLSESSKQGVEEFKNEVLLIAKLQHRNLVTFIGFCLEEHEKILIYEFVPNKSLDYILFDSEQKKLLTWIERFNIIGGIARGILYLHEHSRLKVIHRDLKPSNILLDENMIPKISDFGLARIVEISQDERSTKRIVGT 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi566g00044 733 Pfam Protein kinase domain 570 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi566g00044 733 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 529 643 - -
Vivi566g00044 733 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 14 258 - -
Vivi566g00044 733 FunFam Cysteine-rich receptor-like protein kinase 25 140 248 - -
Vivi566g00044 733 SUPERFAMILY Protein kinase-like (PK-like) 550 733 IPR011009 -
Vivi566g00044 733 ProSitePatterns Protein kinases ATP-binding region signature. 574 596 IPR017441 GO:0005524
Vivi566g00044 733 ProSitePatterns Serine/Threonine protein kinases active-site signature. 689 701 IPR008271 GO:0004672|GO:0006468
Vivi566g00044 733 Gene3D Transferase(Phosphotransferase) domain 1 644 733 - -
Vivi566g00044 733 Gene3D - 27 133 IPR038408 -
Vivi566g00044 733 Gene3D - 139 248 IPR038408 -
Vivi566g00044 733 Gene3D - 278 373 IPR038408 -
Vivi566g00044 733 Gene3D - 382 487 IPR038408 -
Vivi566g00044 733 ProSiteProfiles Gnk2-homologous domain profile. 274 373 IPR002902 -
Vivi566g00044 733 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 644 733 - -
Vivi566g00044 733 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 28 132 - -
Vivi566g00044 733 ProSiteProfiles Gnk2-homologous domain profile. 28 133 IPR002902 -
Vivi566g00044 733 ProSiteProfiles Gnk2-homologous domain profile. 138 248 IPR002902 -
Vivi566g00044 733 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Vivi566g00044 733 Pfam Salt stress response/antifungal 394 483 IPR002902 -
Vivi566g00044 733 Pfam Salt stress response/antifungal 151 246 IPR002902 -
Vivi566g00044 733 Pfam Salt stress response/antifungal 289 370 IPR002902 -
Vivi566g00044 733 ProSiteProfiles Gnk2-homologous domain profile. 379 487 IPR002902 -
Vivi566g00044 733 Gene3D Phosphorylase Kinase; domain 1 532 643 - -
Vivi566g00044 733 FunFam Cysteine-rich receptor-like protein kinase 25 381 487 - -
Vivi566g00044 733 ProSiteProfiles Protein kinase domain profile. 568 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi566g00044 733 SMART serkin_6 568 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi566g00044 274 733 Receptor kinase-like Gene Family AT4G05200 45.528 4.22e-125 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi566g00044 Pkinase 1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi566g00044 - - vvo:131653217 1010.75