Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi566g00043 ATGGCTTATTCCAAACTTCTCTTTTTCTATATCCTTGTTAGTATTTTCCTCTATTTTGCAACTATCAAGGCACAAAACTCTCCATTTTTTCTGTATAGAAACTGTTCCACCAACCTTACCACAACCAGCAGCCTCTTCGAAACCAATCTCAGGACCTTACTCTCTTCATTTTCTTCAAAAGCCACCGGAAACATTGAATTCTTCAACACCACCATCCCTGCTATAAACCCTTCAGATTCTGTATATGGATTGTTCATGTGCAGAGGGGATGTACCCTCTCTGGTCTGTCATGAATGTATACATGATGCAATACAGCAGCTATCCTCACAGTGTTCTTTCTCCAAACAAGCTGTGATTTGGTACAACGAATGCATGCTTCGATACTCCGACAACTACTTCTTTTCATCCGTTGATAAGTCTGGTTTTTCCTTGACCAATACGGCCGATGTCTCAAACACGAAAACCTTCGTCCCTCTATTGTCTTCATTCATGAATCAAACTGCAGATGAAGCAGCAAGTCCACCTTCCGGCGACAAGAACAAGAAGTTTGCCACAAATGAAACACGAGTTTCTGAATTCGAGACACTTTACTGTCTAGCTCAGTGCACGCCGGACTTGTCCCCCAATGATTGCAGAACCTGTCTCAGCAGTGCTATTGAGGAACTTCCAACATGCTGTAATGGGAAGGTGGGTGGAAGATATCTTAATCCTAGCTGTAATGTTAGGTATGAACTATATCCTTTTTATAGGTCTAATGATGTGACTTCACCAAATCACCTTGCTCCTCAAACAAATGATTCAAAACTAGATGATAGATTTTCCCAAAATCCATTTTATCTTTCATATAATTGCTCAAGTAACCACAATACAATCTCTGAGAAAAGCTTCAGATTACTTCTCTCTGATTTATCGTCCAACGCCGCAAGTGGCAAAACATTTCACACTAATGTATCTGACTTAGTGTATGGCCTTTTCATGTGTCGAGGCGACCTTCCATCCCGCCTCTGTGCTTCATGTGTGACAAACGCAGCGGATAAAATATACTCGAAGTGTCTTTCTTTCTCAGAGGGTATAATTTGGTACAGCCATTGCTTGGTTCGATATTCAAATCGGTATTTTGTCCCTAGCATGGAAACAATTCCTATGTACCGCGATATAAACATCACTAATCATTCTACCCCGGACCAAAACTTGTTCGCGAGTACATTATCGAACCAGCTATCTGAACTTGCAAATAAGACAGGAAACAGTGATGGAAAATACATGACAAATTCATTAAAATTGAATGATAAACAAACCTTGTATACTCTTGAACAATGTCAACCAAATTTGTCTAATCAGGAGTGCATTTCATGTCTAAATGATGTGATAAGTAGAGCAGTTCCATGGTCACTTTTGGGAAGTGTTGGGGGAAGAGTTATATATCCTAGCTGCAATCTCAGGTTTGAATTGTTCCAATTTTACATGGAGGCCGGAGACGAAGATCAGCCTTCTACGAGAAATGCAGAGAAACGGACAATTATCTTCATTGTTGTCTCAATCATTATTTTGGTGATACTTTTTTCTGTTGGCTACTACTTGCTAAAGAGAAGGGGAAGGAAGAGTCGTAGGACTATTCTTCGAGAAAATTTTGGTGAAGAAAGTGCTATTGTAGAACCACTACAATTCGATTGGATGGTAATTCAAGCAGCAACAAACAACTTTTCTATTGACAATTACATTGGCAAAGGTGGTTTTGGAGAGGTTTACAAGGGTGTTCTTTCTGATGGTCGAGAAGTAGCTATAAAAAGACTTTCTGAAAGTTCTAAACAAGGTGTGGAGGAGTTCAAGAATGAAGTATTACTGATAGCCAAACTTCAACATAGAAATTTAGTGACATTTATTGGATTTTGCCTTGAAGAACACGAGAAAATACTTATTTATGAATTTGTGCCCAACAAAAGTCTAGATTACATTTTATTTGATTCTGAACAGAAAAAGTTGTTAACATGGATTGAACGCTTTAACATCATAGGAGGAATTGCTCGAGGAATTCTATATTTGCACGAGCACTCTCGACTGAAAGTTATACATCGGGATCTCAAGCCTAGCAATATTCTATTAGATGAAAATATGATTCCTAAAATTTCTGATTTTGGATTGGCTCGAATTGTTGAAATAAGTCAAGATGAAAGAAGTACAAAGAGAATTGTCGGAACATATGGTTATATATCTCCAGAATATGCAATGCTCGGACAATTTTCTGAAAAATCAGACGTTTATAGTTTTGGAGTCATGGTTTTAGAAATTGTTGCTGGAAAGAAGAATATAAGCTCATCAACGCCTCAATCTGTTGTTGACGGCCTCTTGAATTATGTGTGGAGACAATGGATGGATCAAACACCTTTCAACATATTGGACCCAAATATTAAAGAAGACTATTCTAAAAGTGAAGTCATCAAGTGCATTCAAATTGGTCTATTATGTGTTCAACATGACCCAGATGCAAGACCTTCAATGGTGACAGTTGCCTCTTATCTTAGCAGTTATTCAATTGAATTACCAGTACCACATGAACCTGCATTTTTCTTGCGTAGTAAAACTTATTCAACATCTCTTATACAAGAGTCAAGTTCTACTCAATCTGCATATAGTTCTACTCTATTGTCTACAAATGAAATGTCTGCAAGTATTTTTTTACCTAGATAG 2688 0.3795 MAYSKLLFFYILVSIFLYFATIKAQNSPFFLYRNCSTNLTTTSSLFETNLRTLLSSFSSKATGNIEFFNTTIPAINPSDSVYGLFMCRGDVPSLVCHECIHDAIQQLSSQCSFSKQAVIWYNECMLRYSDNYFFSSVDKSGFSLTNTADVSNTKTFVPLLSSFMNQTADEAASPPSGDKNKKFATNETRVSEFETLYCLAQCTPDLSPNDCRTCLSSAIEELPTCCNGKVGGRYLNPSCNVRYELYPFYRSNDVTSPNHLAPQTNDSKLDDRFSQNPFYLSYNCSSNHNTISEKSFRLLLSDLSSNAASGKTFHTNVSDLVYGLFMCRGDLPSRLCASCVTNAADKIYSKCLSFSEGIIWYSHCLVRYSNRYFVPSMETIPMYRDINITNHSTPDQNLFASTLSNQLSELANKTGNSDGKYMTNSLKLNDKQTLYTLEQCQPNLSNQECISCLNDVISRAVPWSLLGSVGGRVIYPSCNLRFELFQFYMEAGDEDQPSTRNAEKRTIIFIVVSIIILVILFSVGYYLLKRRGRKSRRTILRENFGEESAIVEPLQFDWMVIQAATNNFSIDNYIGKGGFGEVYKGVLSDGREVAIKRLSESSKQGVEEFKNEVLLIAKLQHRNLVTFIGFCLEEHEKILIYEFVPNKSLDYILFDSEQKKLLTWIERFNIIGGIARGILYLHEHSRLKVIHRDLKPSNILLDENMIPKISDFGLARIVEISQDERSTKRIVGTYGYISPEYAMLGQFSEKSDVYSFGVMVLEIVAGKKNISSSTPQSVVDGLLNYVWRQWMDQTPFNILDPNIKEDYSKSEVIKCIQIGLLCVQHDPDARPSMVTVASYLSSYSIELPVPHEPAFFLRSKTYSTSLIQESSSTQSAYSSTLLSTNEMSASIFLPR 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi566g00043 895 FunFam Cysteine-rich receptor-like protein kinase 25 381 487 - -
Vivi566g00043 895 FunFam cysteine-rich receptor-like protein kinase 10 644 847 - -
Vivi566g00043 895 FunFam Cysteine-rich receptor-like protein kinase 25 140 248 - -
Vivi566g00043 895 Pfam Protein kinase domain 570 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi566g00043 895 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Vivi566g00043 895 Pfam Salt stress response/antifungal 394 483 IPR002902 -
Vivi566g00043 895 Pfam Salt stress response/antifungal 289 370 IPR002902 -
Vivi566g00043 895 Pfam Salt stress response/antifungal 151 246 IPR002902 -
Vivi566g00043 895 ProSitePatterns Protein kinases ATP-binding region signature. 574 596 IPR017441 GO:0005524
Vivi566g00043 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 689 701 IPR008271 GO:0004672|GO:0006468
Vivi566g00043 895 SMART serkin_6 568 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi566g00043 895 Gene3D - 382 487 IPR038408 -
Vivi566g00043 895 Gene3D - 27 133 IPR038408 -
Vivi566g00043 895 Gene3D - 278 373 IPR038408 -
Vivi566g00043 895 Gene3D - 139 248 IPR038408 -
Vivi566g00043 895 CDD STKc_IRAK 574 840 - -
Vivi566g00043 895 ProSiteProfiles Gnk2-homologous domain profile. 274 373 IPR002902 -
Vivi566g00043 895 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 28 132 - -
Vivi566g00043 895 Gene3D Transferase(Phosphotransferase) domain 1 644 847 - -
Vivi566g00043 895 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 529 643 - -
Vivi566g00043 895 ProSiteProfiles Gnk2-homologous domain profile. 28 133 IPR002902 -
Vivi566g00043 895 ProSiteProfiles Gnk2-homologous domain profile. 138 248 IPR002902 -
Vivi566g00043 895 ProSiteProfiles Protein kinase domain profile. 568 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi566g00043 895 Gene3D Phosphorylase Kinase; domain 1 532 643 - -
Vivi566g00043 895 SUPERFAMILY Protein kinase-like (PK-like) 551 881 IPR011009 -
Vivi566g00043 895 ProSiteProfiles Gnk2-homologous domain profile. 379 487 IPR002902 -
Vivi566g00043 895 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 294 888 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi566g00043 274 895 Receptor kinase-like Gene Family AT4G05200 44.970 1.09e-175 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi566g00043 Pkinase 4.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi566g00043 - - vvo:131653217 1244.57