Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi566g00039 ATGGCTGATTCCCATAACATTCTTCTCATCTTCTCATTTGTTATCTTCCTCACTACTTTCACATCTACAAAATCATGGGATGACCCTTTTTTCATAAGCCAATATTGCTCAAGTAACAGAACATCAGCCAATACTTCCTTCCAAATTAACCTCACCACTTTTCTCTCTTCCTTATCATCCATTGCCACAACCAAAGCCAACACAAAATTTTACAACACAACATTCAACGGAAACAGCCCTTCTGACACAATCTATGGCATGTACTTATGCAGAGATGATGTTCCTTCTCAACTCTGTCAACAATGTATAGTTAATGCAACACAAAGACTTACCTCAGAGTGCTCTTTGTCTAAAGAAGGCATTGTTTGGTATAATGAATGCATGGTTTGGTACTCCACAGCCTTTATCTTCTCACCAGTGGCAAGAACAACACCTATTTTTAACTTGTTCAACACCGACAAAGTCCCAAACGCAAAAAGTTTCATGAGTTTATTGTTTTCTACCATGAACAAAACTGCAGATGAAGCAGCTTTTGGTAAAGGTGTTACAAAATTTGCAGCAAAGGACATAACAATATCAAAATTTCAGACCCTTTATTGTTTAGTTCAGTGCACACCAAATTTGTCACCACATGAGTGTAGATTTTGTCTAAGTGGATTAATAGAGCAACTTCCAGGGTGTTGTGAAGATAGAGTTGGAGGAAGGGTTCTAAATCCAAGTTGTAATATTAGGTATGAATTTTACCCTTTTTATATCGCAAATTCACCAAATCCTTCATCACAACAAATTCTACTTCCCCAAACAAAGAGCTTAGATGCTGATTCAATGGTTTCAGAAAACTCTTTTTACCTTTCACACAATTGTTCAAGTAACAAAACTTTCACTTTTAACAACACTTTCAAAGTTCACTTGACAACCCTTCTTTCTTACTTGTCTTCTAATGCCACAAAAAGTCTCTTTTATAAAGCTCAAGTGGCAAATACAGCTTTCGGGCTCTTCATGTGCCGTGGTGATGTTTCCTTCTCCATATGTGAGCTATGTGTAAAAAATGCAACACAAAGAATAACCAAAGATTGTAACTTTTCTCAAGAGGGTGTGATTTGGTATAGTCAATGCATGATTCGGTATTCGAATGGGAATTTCTTCTCTTTAGTGGACAAAAGTCATGTGTATTATGAGATGAATGTTACCAGTGATTCTAGTCCCAACAAAGAGAGAAACTTGTTCAATTTTGTAATATCAACTACCTTATCAAATGTGGCAATTGTGGCAGGGGATAGTGATGAGAAGTTTGGAACAAAATCATTGGAATTGAATGATTTACAAACACTTTATACACTTGGCCAATGTACACATGATTTGTCAAGTGATGATTGCAAGGGTTGTTTGGGAGATATTATTGGAAATGGAATTCCTTGGCCTTATTTGGGAAGTGTTGGTGGAAGAGTTTTATATCCTAGCTGCAATTTGAGGTTTGAATTGTTCCAATTTTATAGGGACAATGACAATGTTACCACACCAAAAATTACTCATTCTTCATCAGGGAAAAGAAGAAAACGGCCACGAACAATTACCTTGATTGTTTTGCTCTCAGTTGTTCCAGTGATACTCTTCTTTGTTGGATTCTATTTGATAAAGAGAAAAACAAAAAGGAGTTTTAGGTCTATTCTCAATGAAAACTTTGGTGATGAAAGTGCAATTTTAGAGCCATTACAGTATGGCTTAGATGTAATTGAAGCAGCAACAAACAACTTTGCAAATGAAAATTTCATTGGTAAAGGTGGATTTGGAGAAGTTTACAAGGTAAGTGGTAAATGTGATGAAATTTATTATTTAGCTCTTAATTTTTCTACAAATGATGAACTGTATTTTCAGGGCACGCTTTTGGATGGACGGCAAATAGCCGTAAAAAGACTCTCAAAAAGCTCAACGCAGGGTGGAAAAGAGTTCAAGAATGAAGTTTTGTTGATCGCCAAGCTTCAACATAGAAATTTAGTCACATTCATCGGTTTTTGCCTCGAAGAACAAGAGAAAATACTTATTTATGAATATGTGCCGAACAAGGGCCTTGATCACTTCTTATTTGGCGTTCAACAAAGAAAGTTCTTAAGTTGGCCCGAACGTTACAATATTATAAGAGGAATTGCTCAAGGAATTATCTACTTACATGTACATTCTCGACTCAAAGTTATTCATCGTGACCTGAAACCTAGTAATATTTTACTAGATGAAAATATGAATCCAAAAATATCAGACTTTGGCCTTGCTAGAATTTTTGAACTAAACCAAGACGAAGCAAGTACAAATAGGATCGTCGGAACATTAGGTTATATGTCTCCGGAATATGCAATGCTCGGACAATTTTCTGACAAATCTGATGTCTATAGTTTTGGAGTCATGATTTTAGAAATTATGACAGGAAAGAAGAATGTAAGGTCTTATGAATCTATTGTTGGTGATAGTCTCCTGAGTAATGTTTGGAGACAATGGAGGGATGAAACACCATTCAGCATATTGGACCCAAAAATTAAAGGAACTTATTCTGAAACTGAAGTCAAAAAATGTATTCAGATTGGTTTATTATGTGCTCAGCAGTTCCCAGATGCAAGACCAACAATTGCAACAGTAGTTTCATATCTTAACAATGACTTCATTGAATTACCGACTCCGCAAGAACCTGCGTTTTTGTTCCATGGTAAAATGGATGCAAAAGGCAATCCACAAGAATCAAGTTCTACTCAGTCTATTAGTACATCCACAGCTTTGACGGGCAATGATTTGTCTATAACCGAATTGCTTCCTCGATAA 2808 0.3608 MADSHNILLIFSFVIFLTTFTSTKSWDDPFFISQYCSSNRTSANTSFQINLTTFLSSLSSIATTKANTKFYNTTFNGNSPSDTIYGMYLCRDDVPSQLCQQCIVNATQRLTSECSLSKEGIVWYNECMVWYSTAFIFSPVARTTPIFNLFNTDKVPNAKSFMSLLFSTMNKTADEAAFGKGVTKFAAKDITISKFQTLYCLVQCTPNLSPHECRFCLSGLIEQLPGCCEDRVGGRVLNPSCNIRYEFYPFYIANSPNPSSQQILLPQTKSLDADSMVSENSFYLSHNCSSNKTFTFNNTFKVHLTTLLSYLSSNATKSLFYKAQVANTAFGLFMCRGDVSFSICELCVKNATQRITKDCNFSQEGVIWYSQCMIRYSNGNFFSLVDKSHVYYEMNVTSDSSPNKERNLFNFVISTTLSNVAIVAGDSDEKFGTKSLELNDLQTLYTLGQCTHDLSSDDCKGCLGDIIGNGIPWPYLGSVGGRVLYPSCNLRFELFQFYRDNDNVTTPKITHSSSGKRRKRPRTITLIVLLSVVPVILFFVGFYLIKRKTKRSFRSILNENFGDESAILEPLQYGLDVIEAATNNFANENFIGKGGFGEVYKVSGKCDEIYYLALNFSTNDELYFQGTLLDGRQIAVKRLSKSSTQGGKEFKNEVLLIAKLQHRNLVTFIGFCLEEQEKILIYEYVPNKGLDHFLFGVQQRKFLSWPERYNIIRGIAQGIIYLHVHSRLKVIHRDLKPSNILLDENMNPKISDFGLARIFELNQDEASTNRIVGTLGYMSPEYAMLGQFSDKSDVYSFGVMILEIMTGKKNVRSYESIVGDSLLSNVWRQWRDETPFSILDPKIKGTYSETEVKKCIQIGLLCAQQFPDARPTIATVVSYLNNDFIELPTPQEPAFLFHGKMDAKGNPQESSSTQSISTSTALTGNDLSITELLPR 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi566g00039 935 ProSiteProfiles Gnk2-homologous domain profile. 143 250 IPR002902 -
Vivi566g00039 935 ProSiteProfiles Gnk2-homologous domain profile. 29 136 IPR002902 -
Vivi566g00039 935 FunFam cysteine-rich receptor-like protein kinase 10 685 887 - -
Vivi566g00039 935 SMART serkin_6 585 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi566g00039 935 CDD STKc_IRAK 591 882 - -
Vivi566g00039 935 MobiDBLite consensus disorder prediction 901 920 - -
Vivi566g00039 935 Gene3D - 280 381 IPR038408 -
Vivi566g00039 935 Gene3D - 142 250 IPR038408 -
Vivi566g00039 935 Gene3D - 29 135 IPR038408 -
Vivi566g00039 935 Gene3D - 388 497 IPR038408 -
Vivi566g00039 935 Pfam Salt stress response/antifungal 36 133 IPR002902 -
Vivi566g00039 935 Pfam Salt stress response/antifungal 404 493 IPR002902 -
Vivi566g00039 935 Pfam Salt stress response/antifungal 288 378 IPR002902 -
Vivi566g00039 935 Pfam Salt stress response/antifungal 159 247 IPR002902 -
Vivi566g00039 935 ProSiteProfiles Protein kinase domain profile. 585 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi566g00039 935 FunFam Uncharacterized protein 619 684 - -
Vivi566g00039 935 SUPERFAMILY Protein kinase-like (PK-like) 569 908 IPR011009 -
Vivi566g00039 935 Gene3D Transferase(Phosphotransferase) domain 1 685 886 - -
Vivi566g00039 935 Pfam Protein kinase domain 630 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi566g00039 935 ProSitePatterns Serine/Threonine protein kinases active-site signature. 730 742 IPR008271 GO:0004672|GO:0006468
Vivi566g00039 935 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 266 932 - -
Vivi566g00039 935 ProSiteProfiles Gnk2-homologous domain profile. 391 497 IPR002902 -
Vivi566g00039 935 FunFam Cysteine-rich receptor-like protein kinase 25 389 497 - -
Vivi566g00039 935 Gene3D Phosphorylase Kinase; domain 1 558 684 - -
Vivi566g00039 935 FunFam Cysteine-rich receptor-like protein kinase 25 145 250 - -
Vivi566g00039 935 MobiDBLite consensus disorder prediction 905 920 - -
Vivi566g00039 935 ProSiteProfiles Gnk2-homologous domain profile. 282 381 IPR002902 -
Vivi566g00039 935 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 29 135 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi566g00039 277 935 Receptor kinase-like Gene Family AT4G05200 40.909 9.23e-167 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi566g00039 Pkinase 1.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi566g00039 - - vvo:131633388 1869.36