Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi566g00038 ATGGCTGATTCCCATAACATTCTTCTCATCTTCTCATTTGTTATCTTCCTCACTACTTTCACATCTACAAAATCATGGGATGACCCTTTTTTCATAAGCCAATATTGCTCAAGTAACAGAACATCAGCCAATACTTCCTTCCAAATTAACCTCACCACTTTTCTCTCTTCCTTATCATCCATTGCCACAACCAAAGCCAACACAAAATTTTACAACACAACATTCAACGGAAACAGCCCTTCTGACACAATCTATGGCATGTACTTATGCAGAGATGATGTTCCTTCTCAACTCTGTCAACAATGTATAGTTAATGCAACACAAAGACTTACCTCAGAGTGCTCTTTGTCTAAAGAAGGCATTGTTTGGTATAATGAATGCATGGTTTGGTACTCCACAGCCTTTATCTTCTCACCAGTGGCAAGAACAACACCTATTTTTAACTTGTTCAACACCGACAAAGTCCCAAACGCAAAAAGTTTCATGAGTTTATTGTTTTCTACCATGAACAAAACTGCAGATGAAGCAGCTTTTGGTAAAGGTGTTACAAAATTTGCAGCAAAGGACATAACAATATCAAAATTTCAGACCCTTTATTGTTTAGTTCAGTGCACACCAAATTTGTCACCACATGAGTGTAGATTTTGTCTAAGTGGATTAATAGAGCAACTTCCAGGGTGTTGTGAAGATAGAGTTGGAGGAAGGGTTCTAAATCCAAGTTGTAATATTAGGTATGAATTTTACCCTTTTTATATCGCAAATTCACCAAATCCTTCATCACAACAAATTCTACTTCCCCAAACAAAGAGCTTAGATGCTGATTCAATGGTTTCAGAAAACTCTTTTTACCTTTCACACAATTGTTCAAGTAACAAAACTTTCACTTTTAACAACACTTTCAAAGTTCACTTGACAACCCTTCTTTCTTACTTGTCTTCTAATGCCACAAAAAGTCTCTTTTATAAAGCTCAAGTGGCAAATACAGCTTTCGGGCTCTTCATGTGCCGTGGTGATGTTTCCTTCTCCATATGTGAGCTATGTGTAAAAAATGCAACACAAAGAATAACCAAAGATTGTAACTTTTCTCAAGAGGGTGTGATTTGGTATAGTCAATGCATGATTCGGTATTCGAATGGGAATTTCTTCTCTTTAGTGGACAAAAGTCATGTGTATTATGAGATGAATGTTACCAGTGATTCTAGTCCCAACAAAGAGAGAAACTTGTTCAATTTTGTAATATCAACTACCTTATCAAATGTGGCAATTGTGGCAGGGGATAGTGATGAGAAGTTTGGAACAAAATCATTGGAATTGAATGATTTACAAACACTTTATACACTTGGCCAATGTACACATGATTTGTCAAGTGATGATTGCAAGGGTTGTTTGGGAGATATTATTGGAAATGGAATTCCTTGGCCTTATTTGGGAAGTGTTGGTGGAAGAGTTTTATATCCTAGCTGCAATTTGAGGTTTGAATTGTTCCAATTTTATAGGGACAATGACAATGTTACCACACCAAAAATTACTCATTCTTCATCAGGGAAAAGAAGAAAACGGCCACGAACAATTACCTTGATTGTTTTGCTCTCAGTTGTTCCAGTGATACTCTTCTTTGTTGGATTCTATTTGATAAAGAGAAAAACAAAAAGGAGTTTTAGGTCTATTCTCAATGAAAACTTTGGTGATGAAAGTGCAATTTTAGAGCCATTACAGTATGGCTTAGATGTAATTGAAGCAGCAACAAACAACTTTGCAAATGAAAATTTCATTGGTAAAGGTGGATTTGGAGAAGTTTACAAGGGCACGCTTTTGGATGGACGGCAAATAGCCGTAAAAAGACTCTCAAAAAGCTCAACGCAGGGTGGAAAAGAGTTCAAGAATGAAGTTTTGTTGATCGCCAAGCTTCAACATAGAAATTTAGTCACATTCATCGGTTTTTGCCTCGAAGAACAAGAGAAAATACTTATTTATGAATATGTGCCGAACAAGGGCCTTGATCACTTCTTATTTGGCGTTCAACAAAGAAAGTTCTTAAGTTGGCCCGAACGTTACAATATTATAAGAGGAATTGCTCAAGGAATTATCTACTTACATGTACATTCTCGACTCAAAGTTATTCATCGTGACCTGAAACCTAGTAATATTTTACTAGATGAAAATATGAATCCAAAAATATCAGACTTTGGCCTTGCTAGAATTTTTGAACTAAACCAAGACGAAGCAAGTACAAATAGGATCGTCGGAACATTAGGTTATATGTCTCCGGAATATGCAATGCTCGGACAATTTTCTGACAAATCTGATGTCTATAGTTTTGGAGTCATGATTTTAGAAATTATGACAGGAAAGAAGAATGTAAGGTCTTATGAATCTATTGTTGGTGATAGTCTCCTGAGTAATGTTTGGAGACAATGGAGGGATGAAACACCATTCAGCATATTGGACCCAAAAATTAAAGGAACTTATTCTGAAACTGAAGTCAAAAAATGTATTCAGATTGGTTTATTATGTGCTCAGCAGTTCCCAGATGCAAGACCAACAATTGCAACAGTAGTTTCATATCTTAACAATGACTTCATTGAATTACCGACTCCGCAAGAACCTGCGTTTTTGTTCCATGGTAAAATGGATGCAAAAGGCAATCCACAAGAATCAAGTTCTACTCAGTCTATTAGTACATCCACAGCTTTGACGGGCAATGATTTGTCTATAACCGAATTGCTTCCTCGATAA 2736 0.3637 MADSHNILLIFSFVIFLTTFTSTKSWDDPFFISQYCSSNRTSANTSFQINLTTFLSSLSSIATTKANTKFYNTTFNGNSPSDTIYGMYLCRDDVPSQLCQQCIVNATQRLTSECSLSKEGIVWYNECMVWYSTAFIFSPVARTTPIFNLFNTDKVPNAKSFMSLLFSTMNKTADEAAFGKGVTKFAAKDITISKFQTLYCLVQCTPNLSPHECRFCLSGLIEQLPGCCEDRVGGRVLNPSCNIRYEFYPFYIANSPNPSSQQILLPQTKSLDADSMVSENSFYLSHNCSSNKTFTFNNTFKVHLTTLLSYLSSNATKSLFYKAQVANTAFGLFMCRGDVSFSICELCVKNATQRITKDCNFSQEGVIWYSQCMIRYSNGNFFSLVDKSHVYYEMNVTSDSSPNKERNLFNFVISTTLSNVAIVAGDSDEKFGTKSLELNDLQTLYTLGQCTHDLSSDDCKGCLGDIIGNGIPWPYLGSVGGRVLYPSCNLRFELFQFYRDNDNVTTPKITHSSSGKRRKRPRTITLIVLLSVVPVILFFVGFYLIKRKTKRSFRSILNENFGDESAILEPLQYGLDVIEAATNNFANENFIGKGGFGEVYKGTLLDGRQIAVKRLSKSSTQGGKEFKNEVLLIAKLQHRNLVTFIGFCLEEQEKILIYEYVPNKGLDHFLFGVQQRKFLSWPERYNIIRGIAQGIIYLHVHSRLKVIHRDLKPSNILLDENMNPKISDFGLARIFELNQDEASTNRIVGTLGYMSPEYAMLGQFSDKSDVYSFGVMILEIMTGKKNVRSYESIVGDSLLSNVWRQWRDETPFSILDPKIKGTYSETEVKKCIQIGLLCAQQFPDARPTIATVVSYLNNDFIELPTPQEPAFLFHGKMDAKGNPQESSSTQSISTSTALTGNDLSITELLPR 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi566g00038 911 ProSiteProfiles Gnk2-homologous domain profile. 143 250 IPR002902 -
Vivi566g00038 911 ProSiteProfiles Gnk2-homologous domain profile. 29 136 IPR002902 -
Vivi566g00038 911 ProSitePatterns Protein kinases ATP-binding region signature. 591 613 IPR017441 GO:0005524
Vivi566g00038 911 MobiDBLite consensus disorder prediction 881 896 - -
Vivi566g00038 911 SMART serkin_6 585 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi566g00038 911 FunFam cysteine-rich receptor-like protein kinase 10 661 863 - -
Vivi566g00038 911 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 29 135 - -
Vivi566g00038 911 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 546 660 - -
Vivi566g00038 911 MobiDBLite consensus disorder prediction 877 896 - -
Vivi566g00038 911 ProSiteProfiles Gnk2-homologous domain profile. 391 497 IPR002902 -
Vivi566g00038 911 FunFam Cysteine-rich receptor-like protein kinase 25 389 497 - -
Vivi566g00038 911 CDD STKc_IRAK 591 858 - -
Vivi566g00038 911 Pfam Salt stress response/antifungal 159 247 IPR002902 -
Vivi566g00038 911 Pfam Salt stress response/antifungal 36 133 IPR002902 -
Vivi566g00038 911 Pfam Salt stress response/antifungal 288 378 IPR002902 -
Vivi566g00038 911 Pfam Salt stress response/antifungal 404 493 IPR002902 -
Vivi566g00038 911 FunFam Cysteine-rich receptor-like protein kinase 25 145 250 - -
Vivi566g00038 911 Gene3D - 142 250 IPR038408 -
Vivi566g00038 911 Gene3D - 29 135 IPR038408 -
Vivi566g00038 911 Gene3D - 280 381 IPR038408 -
Vivi566g00038 911 Gene3D - 388 497 IPR038408 -
Vivi566g00038 911 Gene3D Transferase(Phosphotransferase) domain 1 661 862 - -
Vivi566g00038 911 SUPERFAMILY Protein kinase-like (PK-like) 569 884 IPR011009 -
Vivi566g00038 911 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 266 908 - -
Vivi566g00038 911 Gene3D Phosphorylase Kinase; domain 1 549 660 - -
Vivi566g00038 911 ProSiteProfiles Gnk2-homologous domain profile. 282 381 IPR002902 -
Vivi566g00038 911 ProSiteProfiles Protein kinase domain profile. 585 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi566g00038 911 ProSitePatterns Serine/Threonine protein kinases active-site signature. 706 718 IPR008271 GO:0004672|GO:0006468
Vivi566g00038 911 Pfam Protein kinase domain 587 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi566g00038 277 911 Receptor kinase-like Gene Family AT4G05200 42.401 3.79e-172 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi566g00038 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi566g00038 - - vvo:131633388 1806.19