Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi566g00029 ATGGGAAGAAAAAAGTTGCTTGTATCAGATTTTGCCCTATCTTTCATGTGGGTATGCTCTGGTGTTCTTCTAAAGTCATTCATAATAAAAAACATGAGCTTTTCTCATTCCCATCTTGCTGAGATTGTGAAATTTTCTTTTTCCATTGCCAACATGTTCTTTTATGCTTTTCTGTCTAAGCTTTTTCATGGTGGTGCCAACAATCCTCTTGCTACTTTGGTTGATGCTATTTCTGGAGATTTTCATAACTTCCTTTTCTGCATTGGCTCTAGAATTCCTGCTCAGGTAATTGGATACATTGTTGGAGTAAAACTTCTTATCGATAACATTCCCGAAGTAGGACGTGGACCACGTTTGAATGTTAACATTCCTCTCGGAGCGTTAACAGAAGGAATATTAACATTTGTAATTGTAATTATTTCGCTTGGGCTAGCTGCCACGAAAATTCGAAGAAATTTCTTCATGAAGACATGGATATCCAGCCTGATCAAGATAATACTTCATAAAGTCGGTTCTGGTCTAACTGGTGGATGTATGAACCCCGCATCTGTAATGGGATGGGCTTATGCTCGAGGGGATCACATAACAAAGGAGCATTTCTTTGTATACTGGCTTGCTCCTATAGAGGCAACTCTTTTAGCAGTATGGACATTCAAATTGCTAGTACGACACATGAGAAAAGATAAAACATGCTCAAAAAGAAAATCAGATTGA 714 0.381 MGRKKLLVSDFALSFMWVCSGVLLKSFIIKNMSFSHSHLAEIVKFSFSIANMFFYAFLSKLFHGGANNPLATLVDAISGDFHNFLFCIGSRIPAQVIGYIVGVKLLIDNIPEVGRGPRLNVNIPLGALTEGILTFVIVIISLGLAATKIRRNFFMKTWISSLIKIILHKVGSGLTGGCMNPASVMGWAYARGDHITKEHFFVYWLAPIEATLLAVWTFKLLVRHMRKDKTCSKRKSD 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi566g00029 237 Pfam Major intrinsic protein 7 217 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi566g00029 237 PRINTS Major intrinsic protein family signature 129 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi566g00029 237 PRINTS Major intrinsic protein family signature 201 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi566g00029 237 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi566g00029 237 PRINTS Major intrinsic protein family signature 161 183 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi566g00029 237 PRINTS Major intrinsic protein family signature 87 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi566g00029 237 PANTHER AQUAPORIN SIP2-1-RELATED 1 237 IPR044226 GO:0015267
Vivi566g00029 237 Gene3D Glycerol uptake facilitator protein. 5 237 IPR023271 -
Vivi566g00029 237 SUPERFAMILY Aquaporin-like 7 228 IPR023271 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi566g00029 1 237 Major Intrinsic Protein MIP AT3G56950 53.782 4.27e-86 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi566g00029 K09875 - gmx:100786138 344.739