Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi566g00002 ATGCAAGAAGATTGGAAGCCAAAAGTAGACATGGTTTTTGATAGCATGAATGATGCTTGGAAATTTTGGATTGATTATGGTGGGAGAGTAGGGTTTGGAGTGAGAAAACAATACATACACAAGAGTAAAGACGGTTCGACTACTTCTTGCAGGTTTGTTTGTTGTAAAGAAGGTTTACGAAAACCAGACAAACGAGATTATAAAACAATCAAGCCAAGAGCTGAGACTAGAACTAACTGTCAAGCAAGGATAGGACTTAAAAACATGGGTGAAGTTTGGATAGTGCGTGATTTTGTCGAGGAACACAACCATATTTTCCACTTGAAAGAAACAACACATATGTTGTCATCTCAACGAAAAGTTTCTGAAATTCAATGTCAACAAATTGAATTAGCAGATGATGCTGGTCTTCAACAAAAGAATTCATTTGATTTGATGAGTAAGGAAGTGGGAGGTAGAACCAACTTGGGATTTACACGTCTTGATCAAAAGAATCACCTCCGAAATAGAAGGCAAAGAAGTTTGGTACACGGGGAAGCCGGATATCTACTACAATACTTTCAAAAGATGTCGGTTGAAAATCCATCTTTCTATCATGCCTATCAAATGGATATGGAAGATCAAATTACTAATGTCTTTTGGGCGGATGCAAGAATGCTCATTGATTATGGATATTTTGGTGACGTAATTTCTCTTGATGCAACATATTGTACAAATAGTTCACATAGACCATTGGCGGTGTTTTTGGGATTTAACCACCATCGAAAAGCTGTGATCTTTGGGGCTGCCTTATTGTATGATGAAACAGCAGAGTCATATAAGTGGCTTTTTGAAACATTTTTAGAGGCACACAAGCAAAAGAAGCCTCAAACTGTTTTTACCGATCAAGATCATGCAATGGCAAAAGCACTTGTTGAAGTTATCCCCGAAACATATCACGGCCTATGTACGTGGCACTTGATGCAAAATGGTATCAAACATTTAGGCAATTTAATGAAAGGTGGATCTCATTTTCTTAGTGACTTAAAAAAGTGCATGTATGAATATGACGATGAAGAACAATTCGAAGAAAGTTGGAGAAATCTCCTTATAAACTACAAGTTTGAGGAAAACACTTGGTTGAGAAGAGTTTACAATGTAAAAGAAAAATGGGCATCTTGTTATATGAAGAAGGCTTTTACATTAGGAATGCGAAGTACCCAACTTAGTGAAAGTGTGAATGCAAATATTAAAAGTATTATGAATGTGAATTTGGATATTATAAAGTTTTTCAAGTGTTTTGAGGATGTTATAGAAGAAAAAAGATATAATGAATCAAAGTGTGAATACGAGGCACGCCAAAAGATACCAAGACTCCGAAACTCATATTCTGATATATTACAACAAATGTCTGAGATTTATACTCCCACTATTTTTGAACTATTCCAAAATGAGTATGAGTTGTTTGAAGCATGTTCTATCAAGAGTTTTAACATACAAACATCAACGATTGATTATGTTATTTCCATGGCAAGGGATTTGGGAGAGTGGCAAGTGTTCTTTAATTTTGATAAGAACTCAATTAATTGCTCTTGTCGTAAGTTTGAGAGTTTTGGCATACTATGTTGCCATTGTTTAAAAGTATTTATTCATATAGGTGTGAAATCGGTGCCTAGAGCTTATATCTTGAAGAGGTGGACAAAATCAGCAAGAAGCGGTGTTTCACATATTGTTGAAGATGCTGATTTTAGTCATGATCAATGTTACAAGGTTATTTGTCCTCGCCTTATTAGGATTGCCACTGAAGCATGTAGAAGTCCTGAAACATTCACTTTTCTTGCCAAAGTTGTTGATGAGTTAGATAAGTGCATACTAAAGTTTCAAAATAGTCATGTAAGTGGTGCACAAGTGAACATTTTTCTTAGCAAAGTTAAAGAGATTGAAAGTAGTATTGATAACTCAACACATGTCAGTGGCTTTAAAAAAAAACAAGGTGGAAAGGGTTCAAAACGTAAGAAAGGTTGGGTTGAAACCAAACTTACTGATAGAAAGAAAAGTGATGGTGCAAGTACTTCTCAAATCAAGATCAATACTGGGACTGTACAGATTATGAAAAGTAAGAAAAGTGAAAAATTAAGCAATTCACAAAGACAAGTGCAGTATGAGGTGGTCGATATGAGTGCACCTATTTGGCTCAATGATGCGTACAATAACATGAAAAATAATGAGACTTTGAGTTCATTTGGTGACATTAGTTTTACTAGCTTATTGATGGAAAACAATCATGAAGATACAAGTGGAAAAGAAGGAGTAGTGGAAGAGAAGGAGTAG 2310 0.3537 MQEDWKPKVDMVFDSMNDAWKFWIDYGGRVGFGVRKQYIHKSKDGSTTSCRFVCCKEGLRKPDKRDYKTIKPRAETRTNCQARIGLKNMGEVWIVRDFVEEHNHIFHLKETTHMLSSQRKVSEIQCQQIELADDAGLQQKNSFDLMSKEVGGRTNLGFTRLDQKNHLRNRRQRSLVHGEAGYLLQYFQKMSVENPSFYHAYQMDMEDQITNVFWADARMLIDYGYFGDVISLDATYCTNSSHRPLAVFLGFNHHRKAVIFGAALLYDETAESYKWLFETFLEAHKQKKPQTVFTDQDHAMAKALVEVIPETYHGLCTWHLMQNGIKHLGNLMKGGSHFLSDLKKCMYEYDDEEQFEESWRNLLINYKFEENTWLRRVYNVKEKWASCYMKKAFTLGMRSTQLSESVNANIKSIMNVNLDIIKFFKCFEDVIEEKRYNESKCEYEARQKIPRLRNSYSDILQQMSEIYTPTIFELFQNEYELFEACSIKSFNIQTSTIDYVISMARDLGEWQVFFNFDKNSINCSCRKFESFGILCCHCLKVFIHIGVKSVPRAYILKRWTKSARSGVSHIVEDADFSHDQCYKVICPRLIRIATEACRSPETFTFLAKVVDELDKCILKFQNSHVSGAQVNIFLSKVKEIESSIDNSTHVSGFKKKQGGKGSKRKKGWVETKLTDRKKSDGASTSQIKINTGTVQIMKSKKSEKLSNSQRQVQYEVVDMSAPIWLNDAYNNMKNNETLSSFGDISFTSLLMENNHEDTSGKEGVVEEKE 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi566g00002 769 Pfam SWIM zinc finger 518 545 IPR007527 GO:0008270
Vivi566g00002 769 ProSiteProfiles Zinc finger SWIM-type profile. 510 546 IPR007527 GO:0008270
Vivi566g00002 769 Pfam FAR1 DNA-binding domain 21 105 IPR004330 -
Vivi566g00002 769 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 615 IPR031052 GO:0006355
Vivi566g00002 769 Pfam MULE transposase domain 229 323 IPR018289 -
Vivi566g00002 769 SMART 26again6 521 548 IPR006564 GO:0008270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi566g00002 MULE 2.9e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi566g00002 - - mtr:112419426 1086.63