Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi559g00019 ATGGCTAGCAGTAGCAGAGACTCTTCAACTTTAGCTCTGAAAAATAGCTATTTTGATGTGTTTGTGAGCTTCAGAGGTGAAGACACTCGCTACAATTTCACGGATTTTCTTTTCGACGCCTTTCAAACTCAAGGCATTTTTGCGTTCAGGGATGACAATAATCTTCCAAAAGGTGAATCCATAGCACCCGAGCTTCTTCGTGCAATCCAAGTTTCTCAGATTTTTATTGTTGTATTCTCAAGGAACTATGCTTCATCAACTTGGTGCTTGCAAGAATTGGAAAGTATATGTGAATGCGTTCAAGTGTCTGGAAAGCATGTTCTTCCTATTTTCTATGATGTTGATCCTTCTGATGTTAGGCATCAAAAAGGAATTTATGCTCAAGCTTTTGCCAAACATGAACACAGATTCCAACATGACTCCCAGATGGTGTCAAGATGGCGAGAAACTCTAACACAGGTTGCCAATCTCTCCGGATGGGATCTGCGTGATAAGCCACAATCTGCAGAGATTAAAAACATTGTTCAAAAGATAATTGATATATTGGATTGCAAATCTTCATCTGTTTCAAAAGATTTAGTTGGTATGGATTCTCCTGTACAAGAATTAGAAAAGCTTTTACTTTTGGACTCAGTTCAAGATGTTCGCGTGGTAGGAATTTGCGGAATGGGAGGAATAGGGAAGACAACTGTTGCTACTGTTTTATATGATCGAAACTCTCAACAATTCGGTGCATGTTGTTTTATTGATGATGTAAGCAAAATTTATAGGCTACACGATGGTCCACTCGGTGCACAAAAGCAAATTATAGATCAAACTCTCGGACAAGAGCACCATAACATATGCAATCATTACAGCGCAACCAATCTGATACGACGCAGGCTATGTCACCAAAGGGCCCTTATGATTCTTGATAACGTTGGTCAAGTCGAACAACTAGAAAAAATAGCTGTGCGTCGTGAATGGTTAGGTGCCGGTAGTAGAATCATTATCATTTCTAGAGATGAGCATATATTGAAACAGTATGGGGTGGATGCAGTTTACCAAATTCCTCTCTTGGATCACACTAACTCTCTTCAATTATTGTGTCGAAAAGCTTTTAAACTTGATTACATTTTGAGTAGTTATGAAGGGTTGGTTAATGGCATACTAAATTATGCCAATGGCCTACCCCTAGCAATTAATGTATTGGGTTCATTTTTGTATGGTCGAGATATTTCTGAATGGAGAAGTGCATTGGCAAGATTGAGAAAAAGTCCAGACAAAGATGTCATGAATGTGTTGCGATTAAGTTTTGATGGGCTAAGGGAGACAGAAAAAGAAATATTTCTTCATATTGCTTGTTTTTTCAATGGAAGTGAGAAGGAATATGTTAAAAATGTTTTAAATTGTTGTGAATTTCATGTTGATATTGGATTAAGGGTTCTTATAGATAAATCACTTGTAAGCACTGAATATGGAATCATTGTAATGCATAATTTGTTGGAAGAGCTAGGCAGAAAAATTGTTCAAGAAAACACAAGCAAAGAGCCCAGAAAGTGGAAAAGGCTATGGTTCGACAAACAGCTCTATGATGTTATGTTGGAAAACATGGAAAAGAATGTTGAAGCAATAGTTTTGGATCATGAATATGAAGAATATAGTGAGGTCGATGAAGGTATGGATGCAGTGATATTCAAAGACTTTTCAAATCTTAGATTGCTCATCATCAAGTATGTGAAAGTATCGGGAAGCCTCAATCGTCTTTCTAATGAATTGAGATATATTGAGTGGAATGAATATCCTTTCATGTATTTGCCATCATGTTTTCAACCCAATCAACTTGTTGAGCTGATATTGAAGTCTAGCAGCATCAAACAACTCTGGGAAGGCAAGAGGAATCTGCCCAAATTGAGAATTTTGGATCTGAGCCACTCCAAAAATCTAATAAAGATGCCAAATTTTGGAGAGTTCCTGAATCTTGAACGGCTAAATCTTAAAGGATGTATTAAACTTGTGATGCTGGATCCATCTATTGGGCTTCTAAGAAAGATTGTTTCCTTGAATTTAAAAGATTGCAAAAGTCTAGTAAGCATACCCAACAACATATTTGGTATCAGCTCTCTCAAAGATCTAAAAATGTCTGGGTGTTCTGGGTGTTGTTTCAAAGATTTTAACAATACAAGGCATTTGGATATAAGTGAAACTGCTTCACATTCCCAATCAACGTCCTCCATTTGCAAATGGACCACAAAGCCTTACCATTCCTTGTTTCCCACTCCCACAACAAACATATGTTTTCTTTAG 2286 0.3727 MASSSRDSSTLALKNSYFDVFVSFRGEDTRYNFTDFLFDAFQTQGIFAFRDDNNLPKGESIAPELLRAIQVSQIFIVVFSRNYASSTWCLQELESICECVQVSGKHVLPIFYDVDPSDVRHQKGIYAQAFAKHEHRFQHDSQMVSRWRETLTQVANLSGWDLRDKPQSAEIKNIVQKIIDILDCKSSSVSKDLVGMDSPVQELEKLLLLDSVQDVRVVGICGMGGIGKTTVATVLYDRNSQQFGACCFIDDVSKIYRLHDGPLGAQKQIIDQTLGQEHHNICNHYSATNLIRRRLCHQRALMILDNVGQVEQLEKIAVRREWLGAGSRIIIISRDEHILKQYGVDAVYQIPLLDHTNSLQLLCRKAFKLDYILSSYEGLVNGILNYANGLPLAINVLGSFLYGRDISEWRSALARLRKSPDKDVMNVLRLSFDGLRETEKEIFLHIACFFNGSEKEYVKNVLNCCEFHVDIGLRVLIDKSLVSTEYGIIVMHNLLEELGRKIVQENTSKEPRKWKRLWFDKQLYDVMLENMEKNVEAIVLDHEYEEYSEVDEGMDAVIFKDFSNLRLLIIKYVKVSGSLNRLSNELRYIEWNEYPFMYLPSCFQPNQLVELILKSSSIKQLWEGKRNLPKLRILDLSHSKNLIKMPNFGEFLNLERLNLKGCIKLVMLDPSIGLLRKIVSLNLKDCKSLVSIPNNIFGISSLKDLKMSGCSGCCFKDFNNTRHLDISETASHSQSTSSICKWTTKPYHSLFPTPTTNICFL 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi559g00019 761 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 184 - -
Vivi559g00019 761 PRINTS Disease resistance protein signature 294 308 - -
Vivi559g00019 761 PRINTS Disease resistance protein signature 626 642 - -
Vivi559g00019 761 PRINTS Disease resistance protein signature 217 232 - -
Vivi559g00019 761 PRINTS Disease resistance protein signature 387 401 - -
Vivi559g00019 761 Pfam NB-ARC domain 200 421 IPR002182 GO:0043531
Vivi559g00019 761 Gene3D - 179 347 IPR027417 -
Vivi559g00019 761 Gene3D - 352 436 IPR042197 -
Vivi559g00019 761 SUPERFAMILY L domain-like 558 727 - -
Vivi559g00019 761 Pfam TIR domain 18 185 IPR000157 GO:0007165
Vivi559g00019 761 Gene3D - 15 178 IPR035897 -
Vivi559g00019 761 ProSiteProfiles TIR domain profile. 16 182 IPR000157 GO:0007165
Vivi559g00019 761 SUPERFAMILY "Winged helix" DNA-binding domain 423 526 IPR036390 -
Vivi559g00019 761 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 713 IPR044974 GO:0006952
Vivi559g00019 761 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 160 IPR035897 -
Vivi559g00019 761 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 446 IPR027417 -
Vivi559g00019 761 SMART till_3 17 157 IPR000157 GO:0007165
Vivi559g00019 761 Gene3D Ribonuclease Inhibitor 510 749 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi559g00019 18 711 WRKY Transcription Factor Family AT4G12020 29.734 1.20e-78 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi559g00019 - - vvo:131605388 1249.96