Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi558g00009 ATGCCTTCTTCTTCCCCTACCTTGCTCTCAAAATGTACCATTTTCCCAGACCAAAAATCAACTATTGCCAACCTTAAACTCTCTGTTTCAGACCTACCTATGCTTTCTTGTCACTACATCCAAAAAGGTTGTCTCTTCACCAAACCTTCTATTCCCTTTCATAACTTAATCCCTCTCCTCAAAACCGCTCTCTCTCAAACTCTCTCTATCTTCCCCCCTCTCGCCGGTCGTTTCACCACCGACTCCGACGGTTATGTTTACTTAACCTGCAACGACGCCGGCGTCGATTTCATCCACGCCACTGCAATTGATCTCTCCATCAGTGATCTCCTCTCAACCACCTATGTCCATCACTCCTTCAAAGAGTTTTTCGCTTTCGATCGAAAAGTCAGTTTCACCGGTCATTTCTCTCCGATTATGGCCGTTCAGGTGACTGAACTCGCTGACGGTGTTTTTATCGGCTGCTCCGTTAATCACGCCGTCACTGATGGAACTTCCTTCTGGAATTTCTTCAACACTTTTGCTCAAGTCTGTAGAGGAGCAAACAAATGCATCAGAAACACTCCGAGCTTCCGCCGCGACTCTGTTTTAATCTCCGACGCCGTTCTCCGGTTATCCAAAGAAGGCCCGGCAGTGACATTCAATGCCGACGCGCCGATAAGAGAACGAATCTTTAGCTTCAACCGTGACGCAATTCAGAAACTGAAAGCCAGAGCTAATAACAAACGGTGGCCGGAAACTAACAATTCCGTTGAATTGATGCAGAAAAACATTAACGATCATTATAACAATAACAACAACCAGAAAGAAAACGGAAAAGTAGCCACGTTAATTGAAAACTGGTTCAAAACCAATGTTAACTCAAAACAGCAAACGGTTACCGTCACGGAAACAGAAACAGTAACAGAAACGGTTGAGATTTCGTCATTTCAATCCATATGCGCGTTACTATGGCGTGCAGTCACGCGCGCGAGGAAATTTCCAGCTTCAAAAACGACGACGTTTAGAATGGCGGTTAATTGTCGTCATAGAATAGAACCAAAGCTAGAAGCGTTTTATTTCGGAAACGCGATTCAGAGTGTTCCAACATACGCTTCAGCGGGTGATGTTATGAGTAAAGACTTACGGTGGTGTGCGGAGCAGCTGAATAAAAACGTGAAGGCGCATGATAATGTTATGGTGAGGAAGTACATAGAGGATTGGGAGACCAATCCTAGGTGTTTTCCTTTGGGGAACCCTGACGGTAGTTCGATAACCATGGGCAGTTCTCCGAGGTTTCCGATGTATGATAACGATTTTGGTTGGGGGAAGCCGTTGGCGGTTAGGAGTGGGAAGGCGAATAAATTCGACGGGAAGATTTCGGCGTTTCCGGGGAGAGATGGGAGTGGGACGGTGGATTTGGAGGTGGTTTTGGCGCCAGAAACTATGGCGGGGCTTGAGGCTGATGCGGAGTTTATGGCTTATGCGACGAGGCAGTTGTGA 1482 0.4649 MPSSSPTLLSKCTIFPDQKSTIANLKLSVSDLPMLSCHYIQKGCLFTKPSIPFHNLIPLLKTALSQTLSIFPPLAGRFTTDSDGYVYLTCNDAGVDFIHATAIDLSISDLLSTTYVHHSFKEFFAFDRKVSFTGHFSPIMAVQVTELADGVFIGCSVNHAVTDGTSFWNFFNTFAQVCRGANKCIRNTPSFRRDSVLISDAVLRLSKEGPAVTFNADAPIRERIFSFNRDAIQKLKARANNKRWPETNNSVELMQKNINDHYNNNNNQKENGKVATLIENWFKTNVNSKQQTVTVTETETVTETVEISSFQSICALLWRAVTRARKFPASKTTTFRMAVNCRHRIEPKLEAFYFGNAIQSVPTYASAGDVMSKDLRWCAEQLNKNVKAHDNVMVRKYIEDWETNPRCFPLGNPDGSSITMGSSPRFPMYDNDFGWGKPLAVRSGKANKFDGKISAFPGRDGSGTVDLEVVLAPETMAGLEADAEFMAYATRQL 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi558g00009 493 Coils Coil 251 271 - -
Vivi558g00009 493 Gene3D - 219 485 IPR023213 -
Vivi558g00009 493 Gene3D - 7 206 IPR023213 -
Vivi558g00009 493 SUPERFAMILY CoA-dependent acyltransferases 37 180 - -
Vivi558g00009 493 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 486 - -
Vivi558g00009 493 Pfam Transferase family 7 486 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi558g00009 16 480 Monolignol Biosynthesis Gene Families AT5G48930 25.316 7.98e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi558g00009 - - gmx:100779616 776.933