Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi558g00006 ATGGAAGATAATAGTATCAATATGTCAGGCTTTTGCATGAGATCTGGAAGTAGTACTAGCAGTGGCACGAAGTGTGGACGTTGGAATCCAACGACAGAACAAGTTAAACATCTGACTCAACTTTTTAGAGCAGGGCTCAGAACTCCAAGCACTGATCAAATTCAAAAGATATCAAATCAACTCAGTTTTTATGGTAAGGTTGAGAGCAAGAACGTGTTCTATTGGTTTCAAAATCATAAGGCTAGAGAAAGACAAAAACGTCGAAAGGTTTCTTTTGATGATGACAACATTGAGAAGGATGTTATTGTTCATCATAGAGACAACTCCATGCATGCTTCTACACAACAACTTGTTGAGATGTACTCAGAGCCTAATAGGGTGATTGAGACTCTTGAGCTTTTTCCATTGAACTCCTTTGGTGAATCAGAATCAGAGAAGTTGAGTATGCATGTAAATGAAAGCATGGAAAGTTCAATATTTGCATACACATGTACAATGGGTGAGCAAATGGAGCATGAGCATCCACCATTAGACTTGCGGTTGAGCTTTGTGTAA 555 0.3874 MEDNSINMSGFCMRSGSSTSSGTKCGRWNPTTEQVKHLTQLFRAGLRTPSTDQIQKISNQLSFYGKVESKNVFYWFQNHKARERQKRRKVSFDDDNIEKDVIVHHRDNSMHASTQQLVEMYSEPNRVIETLELFPLNSFGESESEKLSMHVNESMESSIFAYTCTMGEQMEHEHPPLDLRLSFV 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi558g00006 184 MobiDBLite consensus disorder prediction 1 26 - -
Vivi558g00006 184 CDD homeodomain 27 87 IPR001356 GO:0003677
Vivi558g00006 184 SUPERFAMILY Homeodomain-like 26 88 IPR009057 -
Vivi558g00006 184 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 15 107 IPR044555 GO:0003700|GO:0099402
Vivi558g00006 184 ProSiteProfiles 'Homeobox' domain profile. 21 86 IPR001356 GO:0003677
Vivi558g00006 184 SMART HOX_1 23 90 IPR001356 GO:0003677
Vivi558g00006 184 Pfam Homeodomain 25 85 IPR001356 GO:0003677
Vivi558g00006 184 FunFam WUSCHEL-related homeobox 11 24 92 - -
Vivi558g00006 184 Gene3D - 24 92 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi558g00006 5 184 Wox Gene Family AT3G11260 53.158 5.48e-61 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vivi558g00006 Homeodomain 2.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi558g00006 - - cam:101494967 250.366