Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi558g00005 ATGGCGTCGAGCAAGCGTTCCGTGTTGCAGTTCTCTTCTACGCAGAGTTTGTCGGGGAAGGTTCATCCTCTCGTCATCTTCAACATCTGTGATTGCTATGTCCGTCGTCCTGACCAAGCGGAGCGCGTCATCGGAACGCTACTCGGCTCCGTTCTCCCCGACGGAACCGTCGATATCCGAAATTCATACGCTGTTCCTCACAATGAGTCCGTTGACCAGGTTGCTTTGGATATTGAGTACCACCATAACATGTTGCTATCCCACCAAAAAGTGAATCCCAAGGAAGTTATAGTTGGATGGTATTCAACTGGTCTTGGAGTAACTGGGGGCAGTGCTTTAATTCATGAATTTTATTCTCGAGAAGTATCCAACCCTATACATTTGACTGTTGATACAGGATTTGCAAATGGAGAGGGCTCCATAAAAGCATATGTTTCAAACAATTTGTCCCTAGGAGACCATCAAATTGCTGCACAGTTTCAAGAAATCCCTTTGGATCTTCGTATGGTTGAAGCTGAGCGTATTGGATTTGATAATCTGAAGGCAACTGCTGTTGACAAAATCCCATCTGATTTAGAAGGGATGGAAGCATCAATGACACATCTATTAGCCTTGATTGATGACACCTACAAATACGTTGATGATGTCGTGGAAGGGCGTGTTGTTCCAGACAACAAAATTGGGAAATGTATTTCAGATGTTGTAGGTTCCCTTCCCAAAATTCCTTCCTCAACTTTTGATAAGCTTGTGAACGAGAGCTTGCAGGATCACTTGCTCATGCTATATTTATCTAGCATCACAAGGACACAGCTCAGCCTGGCCGAAAAGTTGAACACGGCTGCTCAGATTCTCTGA 855 0.4456 MASSKRSVLQFSSTQSLSGKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYAVPHNESVDQVALDIEYHHNMLLSHQKVNPKEVIVGWYSTGLGVTGGSALIHEFYSREVSNPIHLTVDTGFANGEGSIKAYVSNNLSLGDHQIAAQFQEIPLDLRMVEAERIGFDNLKATAVDKIPSDLEGMEASMTHLLALIDDTYKYVDDVVEGRVVPDNKIGKCISDVVGSLPKIPSSTFDKLVNESLQDHLLMLYLSSITRTQLSLAEKLNTAAQIL 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi558g00005 284 CDD MPN_eIF3f 20 277 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Vivi558g00005 284 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 9 281 - -
Vivi558g00005 284 Pfam Maintenance of mitochondrial structure and function 171 277 IPR024969 -
Vivi558g00005 284 Gene3D Cytidine Deaminase, domain 2 6 185 - -
Vivi558g00005 284 SMART pad1_6 18 149 IPR000555 GO:0005515|GO:0008233|GO:0008237
Vivi558g00005 284 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 20 120 IPR000555 GO:0005515|GO:0008233|GO:0008237
Vivi558g00005 284 ProSiteProfiles MPN domain profile. 19 150 IPR037518 -
Vivi558g00005 284 FunFam Eukaryotic translation initiation factor 3 subunit F 8 185 - -
Vivi558g00005 284 Hamap Eukaryotic translation initiation factor 3 subunit F [EIF3F]. 17 280 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi558g00005 2 284 Eukaryotic Initiation Factors Gene Family AT2G39990 72.509 7.29e-152 424