Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi557g00016 ATGGAGAACAATTATTCCATGTTGTTTCCTTGTCCTCCTTCTTCAAGCTACACAATTCCATCTAGTAGTTTGAATAATGGTCAAAGCTCGAATGCATTTCTTGGTTTGAAGCCTAGTGATAATAATATGGATCATCATGATCATGATCATGATGAAGATCATGTGAAAGAAGATGAAGGAAGTGTTAAAAAGAAAGGAGAGAAAAAAGCTAAGAAGCCTAAATATGCTTTTCAAACTAGGAGTCAAGTTGATATACTTGATGATGGTTATAGATGGAGGAAATATGGACAAAAAGCTGTTAAAAACAACAAATTTCCCAGGAGCTATTATAGGTGCACACATCAAGGGTGCAATGTAAAGAAACAAGTGCAACGTTTAACCAAAGATGAGGGAGTAGTGGTGACAACATATGAGGGAGTTCATACTCACCCTATTGAGAAAACAACTGATAACTTTGAGCATATCTTGAGTCAGATGCAAATTTACACTCCCTTTTGA 498 0.3594 MENNYSMLFPCPPSSSYTIPSSSLNNGQSSNAFLGLKPSDNNMDHHDHDHDEDHVKEDEGSVKKKGEKKAKKPKYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMQIYTPF 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi557g00016 165 MobiDBLite consensus disorder prediction 1 37 - -
Vivi557g00016 165 Pfam WRKY DNA -binding domain 87 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi557g00016 165 SUPERFAMILY WRKY DNA-binding domain 78 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi557g00016 165 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 20 148 IPR044810 GO:0003700
Vivi557g00016 165 MobiDBLite consensus disorder prediction 1 75 - -
Vivi557g00016 165 Gene3D WRKY domain 73 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi557g00016 165 MobiDBLite consensus disorder prediction 40 66 - -
Vivi557g00016 165 ProSiteProfiles WRKY domain profile. 81 146 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi557g00016 165 SMART WRKY_cls 86 145 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi557g00016 165 FunFam WRKY transcription factor 57 72 146 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi557g00016 25 165 WRKY Transcription Factor Family AT5G13080 65.333 1.83e-59 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi557g00016 WRKY 1.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi557g00016 - - vvo:131633258 284.648