Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi555g00013 ATGGACTCATTCTGGTTATCTACCGTTGGATCTCGTGCTGGATTTGTAGCTTTACTGTTTATGCTATTCTCTTGCTCAACTTTCACTTCCATAGAAGCTTATGATCCGTTAGATCCAAATGGGAATATTACACTCAAATGGGATATTATTAGTTGGACTGCAGATGGATATGTTGCTGTTGTTACGATGTACAACTTTCAACAATATCGCCATATTCAAGATCCGGGATGGACATTAGGGTGGACATGGGCTAAAAAGGAAGTAATTTGGAACATGATGGGAAGCCAAACAACGGAACAAGGAGATTGTTCGAAGTTCAAAGCAGGAATTCCGCATTGTTGTAAGAAGGATCCAACCGTAGTTGATTTGCTACCAGGAACACCTTACAACCAACAGATTGCAAATTGTTGCAAAGGTGGTGTCTTGAATTCGTGGGCTCAGGATCCAAGCAATGCAGTAAGTTCTTTTCAGGTTAGCGTTGGTTCTGCTGGAACAACTAATAAAACAGTTAAGCTTCCGAGAAATTTCACCCTCAGAGCTCCTGGTCCTGGTTATACTTGCGGTCCTGCAAAAATTGTCAAACCGACTCAATTTATTACCAGTGACAAGAGAAGAGTCACACAAGCCTTGATGACATGGAATGTTACCTGCACTTATTCTCAGTTCTTGGCTCAAAAGACACCAACTTGTTGCGTTTCACTCTCATCCTTCTATAACGACACAATAGTAGATTGCCCAACCTGCACCTGTGGCTGCCAAAACAAAACACAACCTGACAGTTGTGTAAATCGAAACTCTCCGCATTTATCGTCAGTTGTATCAGCATCAGGAAAACCTTTAAATACACCTCTAGTCCAATGCACAAGTCACATGTGTCCGATTCGAGTGCATTGGCATGTGAAGCTAAATTATAAAGAGTACTGGCGGATCAAGATCACAATTACAAATTTCAATTACAGAATGAACTACTCACAATGGAATCTTGTGGTGCAGCACCCCAATTTTGATAATCTTACTCAGCTTTTCAGCTTTAAGTACAAGTCCCTAAATCCCTACGAGGGCTTAAATGATACTGGAATGCTTTGGGGAGTGAAATTCTACAACGATTTTCTTTCGTCAGCCGGATCATTAGGTAATGTGCAATCAGAAATCTTATTCAGAAAGGACAAATCAACCTTCACATTCGATAAGGGATGGGCCTTTCCTCGAAGAATTTATTTCAACGGTGATAATTGTGTTATGCCTCCTCCAGATGCTTATCCTTGGTCACCGAACGCATCTTCAAAATTAGTTTTCTCTTTACTTACTACACTCATAGCCACTTTAGCTTCTTTGTTAATCTTATTGAGTTGA 1353 0.405 MDSFWLSTVGSRAGFVALLFMLFSCSTFTSIEAYDPLDPNGNITLKWDIISWTADGYVAVVTMYNFQQYRHIQDPGWTLGWTWAKKEVIWNMMGSQTTEQGDCSKFKAGIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWAQDPSNAVSSFQVSVGSAGTTNKTVKLPRNFTLRAPGPGYTCGPAKIVKPTQFITSDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVDCPTCTCGCQNKTQPDSCVNRNSPHLSSVVSASGKPLNTPLVQCTSHMCPIRVHWHVKLNYKEYWRIKITITNFNYRMNYSQWNLVVQHPNFDNLTQLFSFKYKSLNPYEGLNDTGMLWGVKFYNDFLSSAGSLGNVQSEILFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWSPNASSKLVFSLLTTLIATLASLLILLS 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi555g00013 450 PIRSF COBRA 7 450 IPR006918 GO:0010215|GO:0016020
Vivi555g00013 450 Pfam COBRA-like protein 57 220 IPR006918 GO:0010215|GO:0016020
Vivi555g00013 450 PANTHER PROTEIN COBRA 22 439 IPR006918 GO:0010215|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi555g00013 15 449 COBRA Gene Family AT3G02210 73.624 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi555g00013 - - gmx:100815779 833.172