Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi555g00012 ATGTACAACTATCAACGATATCGCGGTATTCAAAAGCCGGGATGGACATTAGGATGGACATGGGCTAAAAAGGAAATAATCTGGAACATGTTGGGAAGCCAAACAACCGAACAAGGAGATTGTTCGAAGTTCAAAGCCGGAATTCCGCATTGTTGTAAGAAGGATCCAACCGTGGTTGATTTGTTTCCAGGAACACCTTACAACCAACAGGTTGCAAATTGTTGCAAAGGCGGTGTGTTGAGTTCATGGGCTCAGAATCCACGCAATGCTGTAAGTTCTTTTCAGGCTAGTGTTGGTTCTGCTGGAACAACCAATGGAACAGTTGCACTTCCAAGAAATTTCACCTTGAGAGCATCTGGTCCTGGTTATACTTGTGGTCCTGCAAAAATTGTCAAACCGACTCAATTTATTACGAGTGACAAGAGGAGAGTCATACAAGCCTTGATGACATGGAATGTTATCTACAATTATTCTCATAGACTTCAATGA 489 0.4233 MYNYQRYRGIQKPGWTLGWTWAKKEIIWNMLGSQTTEQGDCSKFKAGIPHCCKKDPTVVDLFPGTPYNQQVANCCKGGVLSSWAQNPRNAVSSFQASVGSAGTTNGTVALPRNFTLRASGPGYTCGPAKIVKPTQFITSDKRRVIQALMTWNVIYNYSHRLQ 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi555g00012 162 Pfam COBRA-like protein 1 158 IPR006918 GO:0010215|GO:0016020
Vivi555g00012 162 PANTHER PROTEIN COBRA 1 161 IPR006918 GO:0010215|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi555g00012 1 161 COBRA Gene Family AT5G60920 72.671 1.24e-88 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi555g00012 - - vvo:131633220 349.747