Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi555g00003 ATGGCAGTTAGAAGAAGAAACGCGCTTATTCTCATAAGCACTTTTTCAACCAATTTCTCCACCATTTCTCATCATCATCATCACACATCTCATTACAGAAAACAAATCTCCCTCGCTAATCTCTTCCAATCCTTCGGTTTCCCCTCCTCCAACCTTCACCATTTCCTCTCTCATAACCCATTCCTTTTCAACTCCGATCCATCACACCTTCGCAAATCACTCTCCACTCTCTTTTCCTTCCGAATCCCACAGAAAACCCTAATTTCACTCGTTCACGATTGCCCTTCTGTCTTAGAACCCCAATTTCTACACAATTGGGAATCAGCTTTTCCAAAATTCAAATCCAACGCTTTCAACCCTTCCCCGCTGATGATCGCGAACTTGTTGCGATGTTCTAGAAAGTTCCATTTAAATCCCCTTCAACTCTCGCAAAAAGTTGAGATTTTTAAGGGTTTAGGGTTTTCCGACAATGTTACAGCTAGGGTTTTGGAAGAATTTCCCAGCGCGGTTGTAATGACTGAGGATAAAATTGCTGGGGTAATTGATTTTCTTGTGGAATTCGGTGTTCCTCGAGATGAAATCGATAGGGTTGTTAGATTGTATCCTAGGGTTTTGGGATTTGGAGTTGAAGATAGGTTGAAGCCGCTGATTCATGAGATGAGGGGGTTGGGATTTTCTCGACGGGAGATTAAGGCGGAGGTTGTTAGGGATCCGGGTATTCTAGGAATGGAGATCGGGGAGTTTTCGCGGTGTTTGAAGCTGTTACAGAGTTTGAAATGCAGGGAGGCAGTTAAAGAGAGTATTTTGGGGGATGGTTTGGTTAGAGCTTGTTTTGGAGTGAAATTAAGAGTCGATTGTTTGTGCTGTCACGGGTTGATTCGTAGGGATGCTTTGAAGGTGTTATGGAAGGAACCGAGGTTGATGAGTTACGAGTTGGAGGATATTGAGAAGAAGATTGAGTTTTTAGTTCAAAGGATGAAGTATGGTGTTGAATGTTTGCATGAAGTTCCTGAATATTTGGGTGTGAATTTTGAGAAACAGATTGTTCCTAGATACAATGTGATTGAGTATTTGAAAGGAAAAGGTGCAATTGGCTTTGAAGTTGGATTGAAGGATATTATCAAACCAACTAGGCTTAGGTTTTATAATCTTTATGTTAAGCCTTATCCAGAATGTGAAAAAATATATGGCAGATTTTCGGGGAAGGTTGAAGTTAAAAGAAAGCATCCTGATGGACTTTGGAAGCTGTTCAAACCGAAGAAGTTCTCTCTAACCAGTAAAGATGTGAAGAACATGAAGGCTTTCATGGACTCCTCACTGGTGTAG 1326 0.4133 MAVRRRNALILISTFSTNFSTISHHHHHTSHYRKQISLANLFQSFGFPSSNLHHFLSHNPFLFNSDPSHLRKSLSTLFSFRIPQKTLISLVHDCPSVLEPQFLHNWESAFPKFKSNAFNPSPLMIANLLRCSRKFHLNPLQLSQKVEIFKGLGFSDNVTARVLEEFPSAVVMTEDKIAGVIDFLVEFGVPRDEIDRVVRLYPRVLGFGVEDRLKPLIHEMRGLGFSRREIKAEVVRDPGILGMEIGEFSRCLKLLQSLKCREAVKESILGDGLVRACFGVKLRVDCLCCHGLIRRDALKVLWKEPRLMSYELEDIEKKIEFLVQRMKYGVECLHEVPEYLGVNFEKQIVPRYNVIEYLKGKGAIGFEVGLKDIIKPTRLRFYNLYVKPYPECEKIYGRFSGKVEVKRKHPDGLWKLFKPKKFSLTSKDVKNMKAFMDSSLV 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi555g00003 441 FunFam Transcription termination factor MTERF15 mitochondrial 174 396 - -
Vivi555g00003 441 PANTHER CGI-12 PROTEIN-RELATED 128 389 IPR003690 GO:0003690|GO:0006355
Vivi555g00003 441 Gene3D Transcription termination factor 3, mitochondrial 173 399 IPR038538 -
Vivi555g00003 441 Pfam mTERF 137 250 IPR003690 GO:0003690|GO:0006355
Vivi555g00003 441 Pfam mTERF 283 376 IPR003690 GO:0003690|GO:0006355
Vivi555g00003 441 SMART mt_12 53 83 IPR003690 GO:0003690|GO:0006355
Vivi555g00003 441 SMART mt_12 330 364 IPR003690 GO:0003690|GO:0006355
Vivi555g00003 441 SMART mt_12 125 155 IPR003690 GO:0003690|GO:0006355
Vivi555g00003 441 SMART mt_12 298 329 IPR003690 GO:0003690|GO:0006355
Vivi555g00003 441 SMART mt_12 160 190 IPR003690 GO:0003690|GO:0006355
Vivi555g00003 441 SMART mt_12 231 261 IPR003690 GO:0003690|GO:0006355
Vivi555g00003 441 SMART mt_12 195 226 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi555g00003 mTERF 8.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi555g00003 - - pcin:129319850 548.895