LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi552g00011	ATGCCTTCAGTTTCCTCCAAACGCAGATTCAGATCTCCTGCTTCACCTACTCCGGCCGCCGCTTCTCCGCCCTGTCGGAAATCTCCCCGTCATTCCATCGCTGCATCTCCCAATTCTGCTACATCTGTAGTTCGCAAACTCATCACCGATGAGAATCTAATCGAATCTCATGAAACAGTTGCTGTGAAATCCAAATGGAATCCCAAAGATGGAGAGCAATTGAGGATTGTGAAGGAGGTGTTGCACTTGTCTACTGCACCGTCCACCATAGTGTGCCGTGAGGAGGAGCAAGATGTGGTGCTAGGGTTTTGCAAAGGATCTGTTGAGCATGAAAAGGCTGGGAGTCTATACATATGTGGTTGTCCTGGAACAGGGAAATCGTTATCTATGGAGAAAGTTAAAGTGAATTTACTCAATTGGGCTACAGAGGCAGGATTGCCGATGCCGGATGTTTTATCTGTAAATTGTACATCATTATCAAACACATCTGATATTTTTGCCAAGATACTTGGATTGCACAAAACTCTGGGGAAGAAGGGTTCAGGCACAGCCTTGCAGCAACTTCAGAAAATGTATTCTCATGAATCGCGTACAAAGAACATGATATTGATAGTGGCAGATGAATTAGATTATCTAATAACCAAAGACAGAGCTGTTCTCCATGATCTTTTCATGCTTACCACTTTCCCGTTTTCCAGATGTATACTGATAGGTGTAGCTAATGCAATTGACCTAGCAGATCGATTTCTTCCAAGGCTTACTGCATTAAATTGCAAGCCTACTGTTGTAACTTTTCGAGCATACACAAAAGATCAGATCCTTAGAATTCTTAAAGAAAGACTAAATGAACTTCCTTACACTGTCTTCCAACCACAAGCATTAGAACTATGTGCTAGAAAAGTTGCCGCAGCTTCTGGAGATATGCGGAATGCTCTTTCCATATGCAGGAGTGCAATTGAGATGTTAGAAGCAGAAATTAGAGATTCTGCTTCCAATTTGAATGCCTTGGAAGAGAAATCATCCTCGGAACAAAATCTTCCTACAGCTCTGGATGTTGTGAAAAAACAAGAACTTGATATGGTAAGGATTGATCATATGGCTCTTGCCTTGTCCAAAACATATAGATCACCGGTGGTGGATACAATACAATCTCTGCCACATCATCAACAGATTATACTCTGCTCTACCATGAAACATTTCCGAGGAGCCAAGAAAGACTCAATCCTTGGCGAGTTATATAAATCTTATGCGGCGATATGCAAATCATCACTAATTCCCCCAGCTGGAATTATGGAATTTTCAAACATGTGCAGAGTGTTAAATGACCAGGGCCTTATAAAACTAGGACAATCCCGAGATGATAAATTGAGAAGAGTGACACCCAAAGTAGATGAAGGAGATATTACCTTTGCATTGCAGGGGATCCGCTTTTTTCGAAATTGTCTTCAATGA	1452	0.4174	MPSVSSKRRFRSPASPTPAAASPPCRKSPRHSIAASPNSATSVVRKLITDENLIESHETVAVKSKWNPKDGEQLRIVKEVLHLSTAPSTIVCREEEQDVVLGFCKGSVEHEKAGSLYICGCPGTGKSLSMEKVKVNLLNWATEAGLPMPDVLSVNCTSLSNTSDIFAKILGLHKTLGKKGSGTALQQLQKMYSHESRTKNMILIVADELDYLITKDRAVLHDLFMLTTFPFSRCILIGVANAIDLADRFLPRLTALNCKPTVVTFRAYTKDQILRILKERLNELPYTVFQPQALELCARKVAAASGDMRNALSICRSAIEMLEAEIRDSASNLNALEEKSSSEQNLPTALDVVKKQELDMVRIDHMALALSKTYRSPVVDTIQSLPHHQQIILCSTMKHFRGAKKDSILGELYKSYAAICKSSLIPPAGIMEFSNMCRVLNDQGLIKLGQSRDDKLRRVTPKVDEGDITFALQGIRFFRNCLQ	483

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi552g00011	483	SMART	Cdc6_C_2	393	472	IPR015163	-
	Vivi552g00011	483	FunFam	Cell division control protein	71	256	-	-
	Vivi552g00011	483	Gene3D	-	382	468	IPR036388	-
	Vivi552g00011	483	Gene3D	-	260	381	-	-
	Vivi552g00011	483	Pfam	AAA lid domain	290	324	IPR041083	-
	Vivi552g00011	483	Coils	Coil	319	339	-	-
	Vivi552g00011	483	PANTHER	CELL DIVISION CONTROL PROTEIN 6-RELATED	41	481	-	-
	Vivi552g00011	483	Pfam	CDC6, C terminal winged helix domain	393	471	IPR015163	-
	Vivi552g00011	483	Pfam	AAA domain	111	228	IPR003593	GO:0016887
	Vivi552g00011	483	PIRSF	Cdc6	3	483	IPR016314	GO:0006270\|GO:0051301

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi552g00011	16	482	Core DNA Replication Machinery Family	AT2G29680	59.916	0.0	560

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi552g00011	K02213		-	gmx:100791200	718.383

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