Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi551g00028 ATGGATTCTTCTTCACTTTCACAGAGTAGCACCCCTTTCCAAGTCAACCATAGTTCCTTCCAAAAAAATTATCAAACAATAACCGAGGTTGATTTCTTTAAGAATTACAACAATGATCGTAATAATAATAATAATAATAAGGTTGTTGTCACTCCATTTAGCTGTCCCACCGCTGTCTCTTTCCTTGACATTCATCGTACCAACATGCCATCTTTTCTTGATTTAAAACTCAACACCGGCACCGGTCTCAGGCTCGGTCTCAATATTCTTGCTACCAATGATGCTAGTGATCAAGATGATGATAATGACCTATCATCTAAATTCAACGATGCAGACACTAAGAATACGATGGCTATTCTTCGAGGCAAGCTTGCTCGAATGAAAAAGGAAAATAGTCGATTGAGTTTGATGCTTGATCAACTTCAAACCGACTATGATATGCTGCGGATGCATTTTGAGAAAGTGATGCATGACAACAAGAATGAGGAAGTTGAAGGGTTTGTTGGAAAATTTAAAAAGAAAAGAAGAACTGTGAATGGTGGAGTATTGGTTCCAAGAAATTTTTTGGAGCTTGGTCTGGATATTAATACTGATACTGAGATAGATGCTGAACTATCTTCTTTAAGAATAAGAAGTAATGATCGATTGGGATCGCCGCCGAACACCAACATTGAAGTTTCTTCGGAGGATTTAGTCCTAAATAAGAATGGAAATATTAGTGATGAAGAAAATAAGGAGCTTGATAGAGGGATTGAAAGAGAGAATAGTTCCATTGGTCATTCTGAGAGATTTCAAAGGCTGAATCCTCAAAACTATGCTTCAGACTTTGTTAATATTGATCGAATTGATGTAGCGGCTATCTTGATGAGAGCAAGAGTTTCTGTTAGAGCCAAATCAGAGGTAAATTTGTCAAAAATTTCTGATGGATGCCGATGGAGAAAGTATGGACAGAAAAAAATGGCAAAAGGAAACCCGAGTCCACGTTCTTATTATAGGTGCTCCATGGGTAGTGGTTGTCCAGTGAGAAAACAGGTACAAAAGTGTGCTGAAGACAAAACAGTGGTAATCACAACATATGAAGGATATCATAACCATACTTTACCTCCAGCAGCTATGGAAATGGCACAAACAGCTGCAGCAGCTGCAAGAATGCTTCTTTCAGAATCAACCTCAAGAAACGATGGAAAAGTGAATGCGAGTTTCCTCCAGAGGGCAATTGTTCCTTGTTCTACAAGTCCTACAACTATTTCAACTTCTGTTCCATTTCCGACTATCACACTTGATTTTACTCAAACTCCAAATCCTCTACAACACCAAATGCTTCAAAATCAGTTATAA 1338 0.3812 MDSSSLSQSSTPFQVNHSSFQKNYQTITEVDFFKNYNNDRNNNNNNKVVVTPFSCPTAVSFLDIHRTNMPSFLDLKLNTGTGLRLGLNILATNDASDQDDDNDLSSKFNDADTKNTMAILRGKLARMKKENSRLSLMLDQLQTDYDMLRMHFEKVMHDNKNEEVEGFVGKFKKKRRTVNGGVLVPRNFLELGLDINTDTEIDAELSSLRIRSNDRLGSPPNTNIEVSSEDLVLNKNGNISDEENKELDRGIERENSSIGHSERFQRLNPQNYASDFVNIDRIDVAAILMRARVSVRAKSEVNLSKISDGCRWRKYGQKKMAKGNPSPRSYYRCSMGSGCPVRKQVQKCAEDKTVVITTYEGYHNHTLPPAAMEMAQTAAAAARMLLSESTSRNDGKVNASFLQRAIVPCSTSPTTISTSVPFPTITLDFTQTPNPLQHQMLQNQL 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi551g00028 445 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 100 435 IPR044810 GO:0003700
Vivi551g00028 445 SUPERFAMILY WRKY DNA-binding domain 302 368 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi551g00028 445 ProSiteProfiles WRKY domain profile. 301 368 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi551g00028 445 Pfam WRKY DNA -binding domain 308 365 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi551g00028 445 Coils Coil 124 144 - -
Vivi551g00028 445 Gene3D WRKY domain 290 369 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi551g00028 445 SMART WRKY_cls 306 367 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi551g00028 101 432 WRKY Transcription Factor Family AT4G04450 42.241 2.58e-72 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi551g00028 WRKY 8.2e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi551g00028 - - vvo:131624519 782.711