Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi551g00027 ATGGATTCTTCTTCACTTTCACACACTATCACCCCTTTCCAAAATAATCATCAAACATTAACTGAGCTTGATTTCTTTAAGATTTACAACAACAATAATCATAATAAGGTTGTTGTCTCTTCATCTGCCTCTACCGCTGCTCCCTCTGTCCTTGACATTGATAATATCAAGATACCGTCTTTGCTGGATTTCAAACTTAACATTGGCAGTGGTCTTGATCAGAATCTTGCCGCTACCAATGATTCTAGTGACCAAGATGATGATGATTTGACATCTAAATCCAATGACAAAAACACTAAGAATGAGATGGCTATTCTTCGCGGCAAACTTTCTCGAATGAAAATGGAGAATCGTCGATTGAGTTTTATGCTTGATCAGCTTCAAGCTGATTATGATACCTTGCAAATGCGTTTTGAGAAATTGAAGCAGGACAAGAAGGCCGAGAAAGTTGAACAACAAGGAGGGTTTGAAAGAAAACTTGAAAAGAAAAGGAAATTTGAGAACGGTGGAGCATCGGTTTCAAGAGATTTTTTGGAGTCTAGATCGACTATTAATGCTGATACTGAGATGGATCCTAAACCCTCTTCTTCAAGAACAAGAAATTCTGATCGATTGGAATCCCCGCCTGAGAACAACATTGAAGTTGCCTCCAAAGAATTAGTCCTAACTAAGAATGGGAAAGTTAGTGATGAAGAAAAGAATGATGACTATGGTAAAGGGACTAAAGGAGAGGATAATCATGTTGGTCATGCTGAGAGATTTCAAAACCCGAGTCCTCTAAACTATGCTCCAAACTTTGTTAATGATGATTCAACTGATGTTGCTGCAATCTTGACGAGAGCAAGAGTTTCTATTAGAGCTAGATCAGATGGAATCATGGTTTCTGATGGATGCAAGTGGAGGAAGTATGGACAGAAAATAGTGAAAGGAGACCCGAGTCCTCGTGCTTATTATAGGTGCAGCATGGTTAGGGGTTGCCCAGTTAGAAAACAGGTACAAATGTGTGCTAAAGACAAAAAAGTGGTAATCACAACATATGAAGGCTATCATAACCATACTTTACCACCAGAAGCCATGGGAATGGCACAAACAACTGCTGCTGCTGTAAGAATGCTTCTTTTAGCATCAACTTCAAGTAAAGATGAAACAACAAATGCAACTATTCCTGGTTCTACAAGTCTCGCAACTATCTCAACTTCTGCACCATTTCGGTCAATAACACTTGACTTTACACAAACTCCAAATCCTCTACAACTCCAAATGCCTCAAAAATAG 1275 0.3898 MDSSSLSHTITPFQNNHQTLTELDFFKIYNNNNHNKVVVSSSASTAAPSVLDIDNIKIPSLLDFKLNIGSGLDQNLAATNDSSDQDDDDLTSKSNDKNTKNEMAILRGKLSRMKMENRRLSFMLDQLQADYDTLQMRFEKLKQDKKAEKVEQQGGFERKLEKKRKFENGGASVSRDFLESRSTINADTEMDPKPSSSRTRNSDRLESPPENNIEVASKELVLTKNGKVSDEEKNDDYGKGTKGEDNHVGHAERFQNPSPLNYAPNFVNDDSTDVAAILTRARVSIRARSDGIMVSDGCKWRKYGQKIVKGDPSPRAYYRCSMVRGCPVRKQVQMCAKDKKVVITTYEGYHNHTLPPEAMGMAQTTAAAVRMLLLASTSSKDETTNATIPGSTSLATISTSAPFRSITLDFTQTPNPLQLQMPQK 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi551g00027 424 MobiDBLite consensus disorder prediction 175 192 - -
Vivi551g00027 424 SUPERFAMILY WRKY DNA-binding domain 289 355 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi551g00027 424 SMART WRKY_cls 294 354 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi551g00027 424 MobiDBLite consensus disorder prediction 77 103 - -
Vivi551g00027 424 MobiDBLite consensus disorder prediction 86 103 - -
Vivi551g00027 424 Coils Coil 124 151 - -
Vivi551g00027 424 Pfam WRKY DNA -binding domain 296 352 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi551g00027 424 MobiDBLite consensus disorder prediction 193 207 - -
Vivi551g00027 424 Gene3D WRKY domain 279 356 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi551g00027 424 ProSiteProfiles WRKY domain profile. 289 355 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi551g00027 424 MobiDBLite consensus disorder prediction 161 260 - -
Vivi551g00027 424 MobiDBLite consensus disorder prediction 224 251 - -
Vivi551g00027 424 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 78 416 IPR044810 GO:0003700
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi551g00027 87 413 WRKY Transcription Factor Family AT4G04450 39.589 1.24e-61 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi551g00027 WRKY 3.2e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi551g00027 - - vvo:131633140 580.867