Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi551g00020 ATGCGCTCAGATACCAATTTGAAGACTGGCACTGATCTCTGTCTTGGTCAGAACGTTCTTGCTACCAATGATGCTAGTGAACAAGAAGATGCTGACCTATCATCTAAATCCGATGAAGAAAACGCTAAGAATGAGATGGCTGTTCTTCGAGGAAAACTGGCTCGAATGAAAATGGAGAATCGTCGATTGAGTTTTATGCTTGATCAGCTTCAAACAGATTATGATACCTTGCAAATGCGTTTTGAGAAAGTGAAGCAGGACAAGAAGGCCAAGCAAGTCGAAGGACAAGAAAGGTTTGTTGGAAAATCTGAAAAGAAAAGGAAAATTGAGAATGGTGGAGCATTGGTTCCAAGAGATTTTTTGGAGCATGAATTGGCTACTAATAATGACACTGAGATGGATCCTGAACCTTCTTCGAGAACAAAAAGTTCTGATCAATTGAAATCCCCACAGGAGAACCACATTGCTCCAAACTTTGTTAATGATGATTCAACTGATGTTGCTGCAATCTTGACGAGAGCAAGAGTTTCTATTAGAGCTAGATCAGATGGAATCTTGGTTTCTGATGGATGCAAGTGGAGGAAGTATGGACAAAAAATAGTGAAAGGAGACCCGAGTCCTCGTGCTTATTATAGGTGCAGCATGGTTAGGGGTTGCCCAGTTAGAAAACAGGTAGGCTTTCTCCTTTAA 690 0.4101 MRSDTNLKTGTDLCLGQNVLATNDASEQEDADLSSKSDEENAKNEMAVLRGKLARMKMENRRLSFMLDQLQTDYDTLQMRFEKVKQDKKAKQVEGQERFVGKSEKKRKIENGGALVPRDFLEHELATNNDTEMDPEPSSRTKSSDQLKSPQENHIAPNFVNDDSTDVAAILTRARVSIRARSDGILVSDGCKWRKYGQKIVKGDPSPRAYYRCSMVRGCPVRKQVGFLL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi551g00020 229 Coils Coil 67 87 - -
Vivi551g00020 229 Pfam WRKY DNA -binding domain 189 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi551g00020 229 MobiDBLite consensus disorder prediction 127 160 - -
Vivi551g00020 229 ProSiteProfiles WRKY domain profile. 182 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi551g00020 229 Coils Coil 39 59 - -
Vivi551g00020 229 MobiDBLite consensus disorder prediction 21 41 - -
Vivi551g00020 229 MobiDBLite consensus disorder prediction 127 141 - -
Vivi551g00020 229 SUPERFAMILY WRKY DNA-binding domain 182 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi551g00020 229 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 26 225 IPR044810 GO:0003700
Vivi551g00020 229 MobiDBLite consensus disorder prediction 142 160 - -
Vivi551g00020 229 Gene3D WRKY domain 174 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi551g00020 229 SMART WRKY_cls 187 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi551g00020 12 225 WRKY Transcription Factor Family AT4G22070 33.333 6.74e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi551g00020 WRKY 8.2e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi551g00020 - - vvo:131633142 457.603