Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi551g00007 ATGGATTCTTCTTCACTTTCACACACTGTCACCCCTTTCCAAGTCAACCTTACTGCCTCCCAAAATAATCATCAAACATTAACCGAGATTGATTACTTTAAGAATTACAACGACAATGATCGCAATAAGACTGGCACTGATCTACGTCTCGGTCTGAATGTTCTTGCTACCAATGATGCTAGTGAACAGGATGATGCGGATCTATCATCTAAATCCGATGATGAAAACGCTAAGAATGAGATGGCTGTTCTTCGAGGCAAACTTGCTCGAATGAAAATGGAGAATCGTCGATTGAGTTTTTTGCTTGATCAGCTTCAAACTGATTATGATACCTTGCAAATGCGTTTTGTGAAAGTGAAGCAGGACAAGAAGGCCAAGCAAGTCGAAGGACAAGAAAGGTTTGTTGGAAAATCTGAAAAGAAAAGGAGAATTGAGAGTGGTGGAGCATTGGTTCCAAGAGATTTTTTGGAGCATGAATTGGCTACTAATAATGACACTGAGATGGATCCTAAACCCTCTTGGAGAACAAAAAGTTCTGATCAATTGAAATCCCCACAGGAGAACCACATTGAAGTTGCATCCAAGGAGTTAGTCCTAACTAAGAATGGGAATATTAGTGATGAAAAAAAGAATGACTATGGTAAAGGGACTACAAGAGAGGATAATCATGTTGGTCATGCTGAGAGATTTCAAAAGCCGAGTCCTCTAAACTATGCTCCAAACTTCATTAATGATGATTCAATTGATGTTGTTGCGATCTTGACGAGAGCGAGAGTTTCTATTAGAACCAGATCAGATGGAATCATGGTTTTTGATGGATGCAAGTGGAGAAAGTATGGACAGAAAATAGTGAAAGGAGACCCGAGTCCTCGTGCTTATTATAGGTGCAGCATGGTTAGGGGTTGCTCAGTTAGAAAACAGGTACAAAAGTGTGCTAAAGACAAAAAAGTGGTAATCACAACATATGAAGGCTATCATAACCATACTTTACCTCCAGCAGCAATGGAAATGGCACAAATAACTGCAGCAGCGGCAAGAATGCTTCTTTTAGAATCAACTTCAAGCAAAGATGAAACAACAAATCTAACTATTCCTGGTTCTACAAGTCTCGCAACTATCTCAACTTCTGCTCCGTTTCGGTCTATAACACTTGACTATACGCAAACTCCAAATCTTCTGCAACTCCAAATGCCTCAAAATTAG 1203 0.3973 MDSSSLSHTVTPFQVNLTASQNNHQTLTEIDYFKNYNDNDRNKTGTDLRLGLNVLATNDASEQDDADLSSKSDDENAKNEMAVLRGKLARMKMENRRLSFLLDQLQTDYDTLQMRFVKVKQDKKAKQVEGQERFVGKSEKKRRIESGGALVPRDFLEHELATNNDTEMDPKPSWRTKSSDQLKSPQENHIEVASKELVLTKNGNISDEKKNDYGKGTTREDNHVGHAERFQKPSPLNYAPNFINDDSIDVVAILTRARVSIRTRSDGIMVFDGCKWRKYGQKIVKGDPSPRAYYRCSMVRGCSVRKQVQKCAKDKKVVITTYEGYHNHTLPPAAMEMAQITAAAARMLLLESTSSKDETTNLTIPGSTSLATISTSAPFRSITLDYTQTPNLLQLQMPQN 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi551g00007 400 Pfam WRKY DNA -binding domain 272 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi551g00007 400 MobiDBLite consensus disorder prediction 202 221 - -
Vivi551g00007 400 MobiDBLite consensus disorder prediction 155 221 - -
Vivi551g00007 400 Coils Coil 74 94 - -
Vivi551g00007 400 Coils Coil 102 122 - -
Vivi551g00007 400 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 52 391 IPR044810 GO:0003700
Vivi551g00007 400 SUPERFAMILY WRKY DNA-binding domain 263 331 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi551g00007 400 Gene3D WRKY domain 255 332 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi551g00007 400 ProSiteProfiles WRKY domain profile. 265 331 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi551g00007 400 MobiDBLite consensus disorder prediction 158 176 - -
Vivi551g00007 400 SMART WRKY_cls 270 330 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi551g00007 19 388 WRKY Transcription Factor Family AT1G62300 37.093 1.28e-60 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi551g00007 WRKY 1.4e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi551g00007 - - vvo:131633140 774.237