Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi54g00044 ATGATCAATCAAAAAGCTGAAATCGAATCTCAGCTTCTGATTGAAAACAGAGGAAAATTGGAATCCAAGAAGAAACTGAAGAAAATTAGATCAATGAAGAAGCTTCAGAGATTGTCAAGCAGAGGGAGAAAACCACAGTATGATCATAGCCTCTCAATTATTTCATCTGTTGGCTCAGAAAGTTCACAGCATCAAACCCCAATTGAAGTCACAGATGCATCACCCAATTACATGAAAGCCACAAGTAGTTCTCATGCAAAGGATAGTTTTCAGATTGTGCAAAGACTTGTAAGAAACAAGACTTTAACAAGAATGAGTACCTTGAAACTGAAGAGAAGTTTGACTAGGAAGTTGTCTGGAAAGACTGAATTGAAGAGGAAGCTGAAGTCATCGAGATCAATCAAGCTTGCAGCTGTCAAGGGATCTAAATCGACAACAGGGATAGATTCTGAGTCTATTAATGGAATTGATGGCGAGAATAGGGAAAGTACGAGTGATGCTGGTAATAAGCTTCAGAGAGTCCTTACTAGGAGATTAAGCTTGAAACCAGTGAGGATCTCTGCGAAAAAAACTAGTTGCAAATCGAAGAATTCTTTGGTGGACTCGAGTTTGCATAAAGCTACGTGTTCTTCTGCTATTAAGGATTCTCATTTCCCTGATCGTATTGAACCCCCACAAGAGGGAAGTAGTTCTCAAGGAGTATCGGTTGTTAGGGTTTGTCCTTATACTTACTGCTCTCTTCATGGTCATCGCCACGGTGATTTGCCTCCGTTGAAGCGGTTTGTATCGATGAGGAGACGTCAGTTGAAGACGCAAAAGTCTGTGAAAAAGGATGGGAGATCAAAGCAAATTGGTAATGCAAGGAAAGCCACTCAGAAAACCAAAACTGTTCATAATGAAGATGGCGACTCTCACTTTCAGAATGAGAAAAATGTGGCAAGAGAATCATCGCCTTTTAAGCCTCATGATACTCCGCCATCCACAGTTAATGAAGGTGATGCTTCAACCAAAGGCAAAAATATGAAGCCAGATTATGAAGTGTTGCAGAAGAGTTTTGAACAAGATGTTACTACTACTGGCGTGGCATATGGAGTGCAGGAAAGAGATCAGAAATATATAAAAAAGTGGCATTTGATGTATAAGCATGCAGTATTAAGTAATGCAGGTAAATGTGAAAATAAGCTTCCCTTTGTTGGGAATGAAAAAGAAGGTAGGGAGGAAGATAATGAAGAAAACAACTCTTCTCGTCACAATTGTAGTGAAACAGATTCAGATATGGATGATGAAAAGAAGAATGTAATTGAGCTGGTGCAAAAAGCATTTGATGAAATCCTTCTCCCTGAAGTTGAAGACCTTTCCTCTGACAATCATTTAGAATCTAGAGGCAATGAAACTGACGAGCAACTCTTAGAAAAGAGTGAAGGTAAGATTGAAGAAAGGAATACCCCAACTTTTGCAGAATCTCCTAAAGAAATGCAGAAGATAGAGAACAAATCAAGAAACTGGAGCCGTCTGAAAAGGGTAATCCTCTTGAAAAGGTTTGTAAAGGCATTAGAGAAGGTAAGAAACATCAATTCAAGAAGACCAGGTCCATTGCCTTCAGATGCCAACTTCGAAGCGGAAAAAGTTTTCCTTAACCACCAAACAGCAGAGGAGAAGATAAAAACGGAGTGGATGCTTGACTATGCACTTCAAAAGGTTATTTCTAAACTCGCACCTGCTCAAAAACAAAGAGTGGCACTTCTAATAGAAGCTTTTGAAACGATTCGGCCAATTCAAGAGGTGGAAAATGGACCACAGTCTTCTGTGACGGTGGAGTCTCAGGCGAATCCAATTCAATCACTTGATGCTTCCTCAAATCATAGCAAGGAAGAAATAAGCGACGGAAAGGGTTTTGAGGTAACAGAAAGAGCAAGGACAGACAAGAATACGGCTGCATTTAAAAAAAATGATGAAAGTGCTACTGTGGAATCAACATCAACAGAAGTAGTCAAGTATCCGGATTTCGATATTGGGGCATTGGAGGAAGAAGTAACAACCAAAGGCAAAAATATGGAACCGGATTACTATGTGCCGCAGAAGAATTTTGTGCAGGAAGAGCCTAAACATGGTGGTAGTATTACTGGTCTTCCATATGAAGTGCAGGAAAGAGATCAGAAATATATAAAAAAGTGGCATTTGATGTATAAGCATGCAGTATTAAGTAACACAAGTAAATGTGAAAGTAAGCTTCCCTTTGTTGGAAATGAAAAAGAAGGTAGAGAGGAAGATAATGAAGGAAACAACTCTCTTTGTCATAGTTGTAGTGAAACAGATTCAGATATGGATGATGAAAAGAAGAACGTAATTGAGCTTGTGCAAAAAGCATTTGATGAAATTCTTCTTCCTGAAGCTGAACAAATCTCTTCTGACGATCATTCAAAATCTAGAAGCTATGGCTCTGAAGAAGTACTCTTAGAAAAGAGTGAAGGTAACGTAGAAGAAAGGAATGCCTCAACTTTCAAAGAATCTCCTAAGGAAGCACAGAAGATGGAGGAGAGCAAACCAAAAAGCTGGAGCCATCTGAAAAAGCTAATCCTCTTGAAAAGGTTTGTAAAGGCATTAGAGAAGGTAAGAAACATCAATCCAAGAAGACCAAGACAATCTCCTTCAGATCCCGACTTTGAAGCGGAACATGTTGTTCTTAACCGCCAAACAGCAGAAGAGAGGAGAAAGTCGGAGGAGTGGATGCTTGACTATGCACTTCAAAAGGTTATATCTAAACTCGCACCTGCTCAAAGACGAAGAGTGACACTTTTAATAGAAGCTTTTGAAACGGTTCTGCCATTTCAAGATGCTGAAAATAGACTGCAGTCTTCTGCGACAGTGGAGTCTCAGGAAAATCCAATTGAATCACTCGATGCTTCCACAAATCATGGCAAGGAACAAGTAAACAATGGAAGGGTTTCTCTTTACTCTGCTAAGACATTGCTTGGAAAAGTTTCATGTTCTAATGACAGTACTATGGAATTTTCCGATAAAGCTAGTGAAAATCCAATGCATGAACTTTGCAATCCTTTTGAACCAGTGGAACCAGAGGAGGCTCCAACCAATCGAATAGTTGATGAAGTTCCAGAAGATTTGGTTTCAGATTTGAATACAGAAAACAAAAGTATCAGTTCTGAGTCGCCTGAGAGATACTGTGAAACTAAGAATGTCATCGGTGATAATAGTGAACAATTTTCTTTGACTAAAAGCTTAGTCCTAAATGGTCTTGTGAGATCACTGAAATCTAATTTGGTTGGCCCAGAAGCACCGTCAAACCTATTAGATGAACCAACAAGAGACAGAAAAGATATGATTGAAAAAGATCAGCCGGGAACATCCCAAGCTCCTACAAGTGCTGTTGTAGAATCTGAGACTCAGGTAGAGAAACAAGGCAACACAGGGCTATGGTTCATGGTGTATAAGCACATGGTATCAGATATAACTGAAAACAATCCCAAGACATTAACTGATGGGCCAGATGAGAACGAGTCAGAGTATGAAGGTAGCATAACAAGAGGAAATTCTGTCTCTTATGAAAGTACACCTGTAAATAGTCCAGATGTGCACTTCAAAGATCATGTTGTAGCAGATGCCGAAGTTCAAGCCGAAGTTGAACTTCGACAGATTGAAGCCATCAAGATGGTAGAAGAGGCAATTGATTTCATCCTTCCAGACAGACAGCCACTTCCTGACGATAACACAATTGGCGACAGTACTGAAAGAATGCATAGTCAAGGCTTGAACCAAAAAGAAGAAAAGATGGAATCTGGGAATGGAATAGCCAAGCAACAAAAAGAAGAACCGGTATCAAAGGAGGGAGACAAACCAAAACAGAAATTGTCTAGGAACTGGAGCAATCTTAAAAAATTTATAATGCTTAGAAGATTCATCAAGGCATTGGAAAAAGTAAGGAAATTTAACCCAAGAGGGCCTAGATATCTACCATTAGAACCTGATTCAGAAGCTGAAAAAGTTGAATTGAGGCGTCAAGATATGGCAGAAAGAAAAGGCACAGAAGAATGGATGCTTGATTATGCACTTAGACAGGTTGTGTCCAAATTAACTCCAGTTAGGAAGAGAAAAGTGGAGCTGTTAGTCGAAGCTTTCGAGACAGTCGTGCCAACTGTAAAAAATTGA 4164 0.3958 MINQKAEIESQLLIENRGKLESKKKLKKIRSMKKLQRLSSRGRKPQYDHSLSIISSVGSESSQHQTPIEVTDASPNYMKATSSSHAKDSFQIVQRLVRNKTLTRMSTLKLKRSLTRKLSGKTELKRKLKSSRSIKLAAVKGSKSTTGIDSESINGIDGENRESTSDAGNKLQRVLTRRLSLKPVRISAKKTSCKSKNSLVDSSLHKATCSSAIKDSHFPDRIEPPQEGSSSQGVSVVRVCPYTYCSLHGHRHGDLPPLKRFVSMRRRQLKTQKSVKKDGRSKQIGNARKATQKTKTVHNEDGDSHFQNEKNVARESSPFKPHDTPPSTVNEGDASTKGKNMKPDYEVLQKSFEQDVTTTGVAYGVQERDQKYIKKWHLMYKHAVLSNAGKCENKLPFVGNEKEGREEDNEENNSSRHNCSETDSDMDDEKKNVIELVQKAFDEILLPEVEDLSSDNHLESRGNETDEQLLEKSEGKIEERNTPTFAESPKEMQKIENKSRNWSRLKRVILLKRFVKALEKVRNINSRRPGPLPSDANFEAEKVFLNHQTAEEKIKTEWMLDYALQKVISKLAPAQKQRVALLIEAFETIRPIQEVENGPQSSVTVESQANPIQSLDASSNHSKEEISDGKGFEVTERARTDKNTAAFKKNDESATVESTSTEVVKYPDFDIGALEEEVTTKGKNMEPDYYVPQKNFVQEEPKHGGSITGLPYEVQERDQKYIKKWHLMYKHAVLSNTSKCESKLPFVGNEKEGREEDNEGNNSLCHSCSETDSDMDDEKKNVIELVQKAFDEILLPEAEQISSDDHSKSRSYGSEEVLLEKSEGNVEERNASTFKESPKEAQKMEESKPKSWSHLKKLILLKRFVKALEKVRNINPRRPRQSPSDPDFEAEHVVLNRQTAEERRKSEEWMLDYALQKVISKLAPAQRRRVTLLIEAFETVLPFQDAENRLQSSATVESQENPIESLDASTNHGKEQVNNGRVSLYSAKTLLGKVSCSNDSTMEFSDKASENPMHELCNPFEPVEPEEAPTNRIVDEVPEDLVSDLNTENKSISSESPERYCETKNVIGDNSEQFSLTKSLVLNGLVRSLKSNLVGPEAPSNLLDEPTRDRKDMIEKDQPGTSQAPTSAVVESETQVEKQGNTGLWFMVYKHMVSDITENNPKTLTDGPDENESEYEGSITRGNSVSYESTPVNSPDVHFKDHVVADAEVQAEVELRQIEAIKMVEEAIDFILPDRQPLPDDNTIGDSTERMHSQGLNQKEEKMESGNGIAKQQKEEPVSKEGDKPKQKLSRNWSNLKKFIMLRRFIKALEKVRKFNPRGPRYLPLEPDSEAEKVELRRQDMAERKGTEEWMLDYALRQVVSKLTPVRKRKVELLVEAFETVVPTVKN 1387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi54g00044 1387 MobiDBLite consensus disorder prediction 24 47 - -
Vivi54g00044 1387 MobiDBLite consensus disorder prediction 1103 1117 - -
Vivi54g00044 1387 SMART CaM_binding_2 1270 1383 IPR012417 GO:0005516
Vivi54g00044 1387 SMART CaM_binding_2 473 591 IPR012417 GO:0005516
Vivi54g00044 1387 SMART CaM_binding_2 828 942 IPR012417 GO:0005516
Vivi54g00044 1387 MobiDBLite consensus disorder prediction 797 848 - -
Vivi54g00044 1387 MobiDBLite consensus disorder prediction 452 473 - -
Vivi54g00044 1387 MobiDBLite consensus disorder prediction 1253 1288 - -
Vivi54g00044 1387 MobiDBLite consensus disorder prediction 267 341 - -
Vivi54g00044 1387 MobiDBLite consensus disorder prediction 799 848 - -
Vivi54g00044 1387 MobiDBLite consensus disorder prediction 321 335 - -
Vivi54g00044 1387 MobiDBLite consensus disorder prediction 394 428 - -
Vivi54g00044 1387 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 616 942 IPR044681 GO:0005516
Vivi54g00044 1387 MobiDBLite consensus disorder prediction 293 310 - -
Vivi54g00044 1387 Pfam Plant calmodulin-binding domain 1281 1383 IPR012417 GO:0005516
Vivi54g00044 1387 Pfam Plant calmodulin-binding domain 490 589 IPR012417 GO:0005516
Vivi54g00044 1387 Pfam Plant calmodulin-binding domain 839 942 IPR012417 GO:0005516
Vivi54g00044 1387 MobiDBLite consensus disorder prediction 1094 1128 - -
Vivi54g00044 1387 MobiDBLite consensus disorder prediction 1234 1288 - -
Vivi54g00044 1387 Coils Coil 1256 1276 - -
Vivi54g00044 1387 MobiDBLite consensus disorder prediction 749 776 - -
Vivi54g00044 1387 MobiDBLite consensus disorder prediction 24 40 - -
Vivi54g00044 1387 MobiDBLite consensus disorder prediction 396 428 - -
Vivi54g00044 1387 MobiDBLite consensus disorder prediction 1158 1177 - -
Vivi54g00044 1387 MobiDBLite consensus disorder prediction 147 168 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi54g00044 198 955 Calmodulin-binding Proteins AT5G04020 28.177 1.13e-42 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi54g00044 - - psat:127126396 2362.03