Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi54g00031 ATGGCGCCAAAAAGAAAACATTCCTCAATCTTCATCGGTAATTGTGAGGTTACTGTCGAAGCCAGCACTTTCACATGCAATTCCAGTTCCAACAACCTCTTAATCTCTCTTCCTCAAAGCGGAAATATTAAAGTATCTGTAGCGGCACAGGACATTTCTGCAAACCACAAAAACACTTCTGAGTCTGAAAAAACAGAACACGAGTTCCAGCTGCTTAATCCGAAAGATGTTGACGATATTAGCAAATCCTACCTCCAGGAAGTATTGCAGATGTATATGACAGAGCTACCTGGAATGAATTATGCTGCAAATACTGGAAAGCAATCAAAGTTTCTTGAGAGATGTGTGACTAATGGGAAATATCGAACACTACTTCTGAAATCCAGTTTGGCTAGAGATTCAGGAAAGGTTATAGCTGCAATCACTTATCAAATCATCCCTGCAGATACAGAATATGCAGAGATCCCACTTGCAGCTGTCAATGCAATCTATCAACGGAAGGGTTTTGGTCATCTATTGTTTATAGAGCTGAAGAGGAGACTTCAAAATGTTGGCATTCGCTCTATTTTCTGTTGGGGAGACAAAGAATCTGAAGGATTTTGGCTTAAACAGGGTTTTTCATCAATAGCAGAGGTGGATACCAGAGGTAGAGCCCGCAGGTTACCTATAAAAGCTGATATTCGCAAAACATTATGCTTACCCGGTGGTTCAACACTGATGGTTTGCCACTTAAAGAAGGAATTGCTAGATGACAATACTAACTCTGGGAAGCGTCTCCTCTCACAGCCTCATCAGAACTCATCTCCACCTGCAATTATTGAAAATGAGCAGTGTGAAGTTTCAGATGAGCTACTCATTGATTTTATATCATCCCATAGAAGAGACACAGCTCAAAGTAAACCTAAGGCTTTGGCAAAAGACGGATCTTCACGGGGACATGGAAAACTGAGTGGCCACAACTCTAAGAGCTGCTGCAATGACACTGTTCCCTCTAACACAACAAATTGTTCTCAATCTACAAAAGTTGAGAAGAGGGCCTGGGAAGCCTCTTTATCCTCGTTGAAGTCAAAGAGAGTGAAGGGAAGCCAGTTAGTTGACTGTCGATCAGATTCTAGCTGGGGTTTTATGCCGGAGGCTGAAAGGGCCAATCCTTGTTATGTAGAAGCCTCTCATGGTGATACTTTAATTACAAAGAAGTCTGAAAAATGTATTGGAGACCATATGCATTTTGAAGCTCCGATCAACCTAGAACCGCCATCAACTAAACAATGCTTTAGAATCATGTTGATGAATATCAATGATGATGCTAAGAAAACACAGCTTGCAAAGGTGATTGAAGACCTTGGTGGAACTGTTGCCGCTGATGGAAGCACAACCACACATGTTGTCACAGGAAAAGTGAGAAAAACTCTGAATTTCTGCACCGCTCTCTGTTCAGGTGCCTGGGTGGTCTCATCAAGTTGGTTAAAAGAGAGTTTTCGTACAGGCAGATTTGTTGATGAATCGCCTCACATACTGAATGATGAGGATTATTTGTTGAAGTACAAATTGGATTTAAGAAGTGCAGTTTTCCGAGCAAAAGCTTGTCCCCATGCTTTATTCAAGGGGTATAATATTTGTATTGCAGCTAATGTTCAAACTCCTGCAGAAACTCTGTCTGCTATTGTTAGCTCTGCTGGTGGTAATGTTATTAGTGGACTTGAAAAAGTAACTGAAGTATCAACAACGATCTTTGTGACATGTGAAGAAGATATAAACGAAGCAATGATGGCTTCAAAGAAAGGTATAAGAACTTTCAATAGTGAGTGGTTTATGAACTGTGTCATGAGACAAGAGCTTGACTTGGAAGCCCCTCAATTTGTAGAGTCCTTATAA 1875 0.4091 MAPKRKHSSIFIGNCEVTVEASTFTCNSSSNNLLISLPQSGNIKVSVAAQDISANHKNTSESEKTEHEFQLLNPKDVDDISKSYLQEVLQMYMTELPGMNYAANTGKQSKFLERCVTNGKYRTLLLKSSLARDSGKVIAAITYQIIPADTEYAEIPLAAVNAIYQRKGFGHLLFIELKRRLQNVGIRSIFCWGDKESEGFWLKQGFSSIAEVDTRGRARRLPIKADIRKTLCLPGGSTLMVCHLKKELLDDNTNSGKRLLSQPHQNSSPPAIIENEQCEVSDELLIDFISSHRRDTAQSKPKALAKDGSSRGHGKLSGHNSKSCCNDTVPSNTTNCSQSTKVEKRAWEASLSSLKSKRVKGSQLVDCRSDSSWGFMPEAERANPCYVEASHGDTLITKKSEKCIGDHMHFEAPINLEPPSTKQCFRIMLMNINDDAKKTQLAKVIEDLGGTVAADGSTTTHVVTGKVRKTLNFCTALCSGAWVVSSSWLKESFRTGRFVDESPHILNDEDYLLKYKLDLRSAVFRAKACPHALFKGYNICIAANVQTPAETLSAIVSSAGGNVISGLEKVTEVSTTIFVTCEEDINEAMMASKKGIRTFNSEWFMNCVMRQELDLEAPQFVESL 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi54g00031 624 CDD NAT_SF 130 192 - -
Vivi54g00031 624 Gene3D BRCT domain 531 623 IPR036420 -
Vivi54g00031 624 ProSiteProfiles BRCT domain profile. 529 613 IPR001357 -
Vivi54g00031 624 MobiDBLite consensus disorder prediction 295 324 - -
Vivi54g00031 624 Gene3D - 65 232 - -
Vivi54g00031 624 Gene3D BRCT domain 416 530 IPR036420 -
Vivi54g00031 624 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 321 617 - -
Vivi54g00031 624 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 69 213 IPR016181 -
Vivi54g00031 624 CDD BRCT_PAXIP1_rpt6_like 533 614 - -
Vivi54g00031 624 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 75 226 IPR000182 GO:0016747
Vivi54g00031 624 MobiDBLite consensus disorder prediction 295 313 - -
Vivi54g00031 624 SMART BRCT_7 531 611 IPR001357 -
Vivi54g00031 624 SMART BRCT_7 417 496 IPR001357 -
Vivi54g00031 624 ProSiteProfiles BRCT domain profile. 427 506 IPR001357 -
Vivi54g00031 624 Pfam Acetyltransferase (GNAT) family 131 206 IPR000182 GO:0016747
Vivi54g00031 624 Pfam BRCA1 C Terminus (BRCT) domain 434 493 IPR001357 -
Vivi54g00031 624 SUPERFAMILY BRCT domain 531 614 IPR036420 -
Vivi54g00031 624 SUPERFAMILY BRCT domain 426 508 IPR036420 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vivi54g00031 Acetyltransf_1 1.1e-05 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi54g00031 - - vvo:131612402 1223.38