Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi54g00029 ATGGAACCTGGAATAGCAGAACGAGAAAGATTAGAGAATTCCAGAGGAGCTTCCCAATCGGAGTTGACAAAAGATCGAAGCTTTCTATTAGAGTTGATACTGAATAGGAGTTTTCAATCAAAGTCGACGCGAAATAAACGCGAGCACGGAGGAGAAGATGATGATTCAGAGAACTTGAAAAACAAGTATGACATTGAGGAAGCTAGAGAACAGAAGAATGATTTTAGCAGCTATGTGAAGTATCAGATGGTAGATGAAAGGTCAGTGGAAACCCAAAGTCACGAACTTCAAAAATTGCTCGAGATAATCATTGAAGAAGAAGATCTAGTAAATCTTCAAGAAGCCTTGTCATCTATGGATGCATATTTATGGCAAGAAGCTATAAACAATGAGTTTCTCTCTGAAAATGAGAGAGAAAGCTCTCAGATTTTGGATGATTTTGGTGAAGTGTGGATGAAAAAAAACGGTGAAGTGAGAGGGAGAGTGGTTTATATGGTTGCTGAAGGAGAGAAAGCAGTTAGAGTTGAAGAGATGTTTTTGATTGTTTGGTTTTCTGTTATTGGGTTAGAGGTTAGGGAATTCTGTTATGGTAGTTATAATTGGTTAGGACAGACTGGACGTGAAACAGAACTCATTAAAGAAATTGTTGCCGAAGTATGGAAAAGGTTACAACCTAAATTGCCACAGTATGATGATGAATTGGTTGGAATTGATTCGAGGATAAACACCATGTGTTCACTTTTAAGGACAGAGTCTCAGGAAATTCGCTTTGCGGGGATATGGGGCATGGGCGGCATAGGAAAGACAACTCTAGCCAAACTTGTGTATAAGAAAATCCATAACCAATTTGATTTCAGTTGCTTTCTTGAGAATGTTAGAGAGGTTTCTAGCGAAAGAGATGGTCTGCTTTGCTTACAAAGAAAATTGCTTTCAAATCTAAAAATAAGCAGCTTGAGAATTGAAAGTTTGGACCAAGGAAAGGAGACAATACGGAATCTTTTATTCAACAAAAAAGTTCTCCTTGTCCTTGATGACCTAAGTTCTGATATCCAACTAGAGAATTTAGCTGGAAAGCAAGAATGGTTTGGTCCTAGAAGCAGGGTAATAATAACAACTAGAGACAGGCATCTCCTAGTATCACTAGGCGTGTGTGAAACTTATGATGCTCAAATCTTAAACAGAGATGAATCCCTTCAACTTTTTTGTCAAAAAGCTTTTAGAAGAGCAAAACCTAAAGAAGATTTCATTGAGTTGTCAAAACGGGTGGTTCAATATGCTGGAGGTATTCCCTTGGCACTCAAAGTGTTGGGTTCATTCCTTTGTGGACGAAGGGCATCTGTATGGGAAGATGCGTTGAAAATGTTGCAGCAGGATCTGCAAAATGATGTTTACAAGACATTAAGAATAAGTTACGATGGATTGCGGGATATGGAAAAGGCAATATTCTTAGATATTGCTTGTTTTTTCAAAGGGAAGCCCAAGGATCATGTAACACAAATATTGAAAAAATGTGGTCTTAATCCATTGATAGCTATAGATGTTCTTATTGAAAAATCATTGATAACTGATGATGGGTGGCATTTGAGGATGCACGATTTGCTGCAAGAAATGGGTAGAAATATTGTTCTGCATGAATCTCTTAATGATGCCAGTAAGCGGAGTAGGTTGTGGTCTGTCAAGGACATTGATCAAGTATTGAGAAGTAATAAGGGAACTGAATCCACTCAAGCTGTAGTTCTAAGTCTTCCTGATCCTGAAGCATTCGAAGCAAGTTGGAACCCTGAAGCTTTTGCAAAGATGGGTAATCTTAGATTGCTCATGATACTAAATAAATTGCAACTTCCACTTGGTCTCAAATGTCTTCCCAGTGGGTTAAAAGTGCTTGTGTGGAGGGAATATCCTCTTGAGTCATTGCCAGTTGGAGACCAATCGAATGAACTTGTTGACCTTGATATGTGTCATAGCAAAATAAAGCACCTTTGGAGAGGAATGAAGCTTCTGGAAAATTTGAAGACCATTAATTTGAGAAATTCCAAAAATCTACATCAAACTCCAGATTTCACTGGAATTCCAAATCTTGAAAAATTGGATCTTGAAGGCTGCATAAACCTGGTTGAGGTTCATGCTTCTCTTGGACTTCTTAAAAAGCTTTCATATGTGACATTAGAAGATTGCAAAAATCTTAAAAGCCTTCCGGGAAAATTGGAAATGAATTCTTTGAAGCTTCTCATTCTATCAGGCTGCACAGCAGTTAGAAAGCTTCCTGATTTTGGGGAAAGCATGACAAATCTATCCATACTTGCTTTGGATGAGATTTCCATAGCTGAACTACCTCCAACTATTGGTTACTTGACAGGTCTTCATAGCTTGGTTTTACGGGAATGTAAAAATATTGTTTCCCTTCCAAATACCTTTTCTAAGTTGAAATCTCTCAAAAGGCTCAACCTATCTGGTTGCTCAAAATTTTCCAAGCTTCCTGATAATTTGCATGAAAATGAGGCTTTGGAGTGTCTTAATGTGAGTGACAGTGCTATAAGAGAAGTTCCTCCATCCATTGTCCATTTGAAAAATCTTGTATTACTTTTATTTCATGGATGCAAAGGAATTGCATGGACCTCAGAGAGCTCCCGCCTCCCTTTGGGTAAGTTTTTCAGGTTTGGTACTCATACAATGCCCAAGAAATTGATCTTACCTTCTTTTTCTGGTTTATCCTCATTGAAGAAACTAGATTTAAGCTATTGCAATCTCTATGATGAATCAATTCCGGATGATCTTGGCTGTTTATCATCATTGGTAACATTAGATTTAAGTGGGAACAATTTTGTGAACCTTCGTGATGGCTGCATATCTAAACTATCAAAGCTAGAAAGACTTGAGTTGAAGAGTTGCCAAAACCTGCAATCATTGCCTAAGTTACCACCAAATGTACATTTTGTAAATGCAAGTGATTGTGGTTCAATGGAACCCTTATCAAATCCACAAGAGATATGGGGTCACTTGGCATCATTTGCCTTTGACAAGTTGCAAGATGCAAGTCCAATTAAAACTTTATTGGTAAGTCCTGGAAACGAAATTCCGTCGACATTTTTCTATCAAAATTATTTTGATCGGGACATACAATATTTAAAAGATAACTACATATGGGCTGATTCTACTGTGTCAATATCAACGGATATAGCTCAGCTTTGTCAACGGTATGATAGAAGTGAATGGTGGGGAATGTTAGTCTGTCTTGTCGTAGAAGATGTGGCTTCTTCTACACCTTCCCAGGACTATCGTGTCGGTTGGATTTCAAAAGTTCCTGCTACTACAAATAATATTTTGGGTCAGCTATGTCAAAAGTTGTTGGAGCATGGTTTCATTTCTGGGGTACCAAATTCCAAGCACCCTCATCTATTGGTTTTGTATATTCCTGTTCCTTCTTCCCGTTGGTGTTATGTTCAAGACAAGTTTCAGTTAATATTTTTCAGCTCTAGTCTTAAGAGTAAGTTAGTTATAAAGAAATGTGGGTGGCGCGTATTATGTAAGGAAGATGCACAACTCATGCGCAAAAGTCTGCCTGAATGCAGCACTTCTTCTGCCAACCAATGTGTCTCACGAGGAAATTGCTTATCTTCTCCTTTAACATCTTGGAGATGGATAAGCCATCTCAAGGTTCCCCGATGTTTCAAGACTTTCCTGTTGGCAGTCCTATGTGAACGCTTGCCTACTATTGCAAAGTGCAGGTTCTGTACCATGGAAGCGACTACTACTATCCATGTTTTAAGAGACTGTAGGCGAGCTTGTGCAATTTGGGTTCAAATGGTTCCTCCTCAAGTGCGTGAAGAGTTTTTTTCAATTTCTCTTCATGATTGGATGCATAGGTTCCTTCAGAAGTCCTGGTTGCCAAATAACTGTGAAGACTATGATGCTGACTGCTTGAGGTTTTCAGTCACCACTTTTCTTCTCTGGAAGGATGGAAATAATTCCATCCCTGAGGGAGATTCTCTAACAGATAATGGTTTGTATTCTATGATCAAGTCTCTAGTACAAGAACACACCTCACCTACCAGGCATTTTATTAAGTTGAATGTGGACAGTTGTTGCATGGAAAATCCTAGAAATGCTGGTTATGGGGGTCTCTTTCGTGATGTGGAGGGGAATTGGCTTGGTGGGTTCTATGGCTCTCTGGGCTTTGCAACTAACATGAAAGCTGAGCTTTATGCCATTTGTCAAGGTTTGATCACTGCTTGGGATTTGGGTTACAAAAATATGTTAGTTGAAACTGATTCTTTGGAAGCTATCAATCACATTGAAGAGGCCAATATTGAGCATGATGCCTATCGTAGCTTGGTGGCTGACATACGCTCTCTCATGAAAAGAAATTGGTCCCTAAATTTGGTCCATTCTCTCAGAGAAGATAATGCTTGTGCAGATATTTTATCGAGACTTGGAGCTGAGCAGCACGAGGTCTATTGCTTCCATGCTTATCCACCACAACAGCTTCAGCGGGCATTGATTGCCGATGCCCTCCGTGTTCAACTTCCTTCCATGTAG 4536 0.3913 MEPGIAERERLENSRGASQSELTKDRSFLLELILNRSFQSKSTRNKREHGGEDDDSENLKNKYDIEEAREQKNDFSSYVKYQMVDERSVETQSHELQKLLEIIIEEEDLVNLQEALSSMDAYLWQEAINNEFLSENERESSQILDDFGEVWMKKNGEVRGRVVYMVAEGEKAVRVEEMFLIVWFSVIGLEVREFCYGSYNWLGQTGRETELIKEIVAEVWKRLQPKLPQYDDELVGIDSRINTMCSLLRTESQEIRFAGIWGMGGIGKTTLAKLVYKKIHNQFDFSCFLENVREVSSERDGLLCLQRKLLSNLKISSLRIESLDQGKETIRNLLFNKKVLLVLDDLSSDIQLENLAGKQEWFGPRSRVIITTRDRHLLVSLGVCETYDAQILNRDESLQLFCQKAFRRAKPKEDFIELSKRVVQYAGGIPLALKVLGSFLCGRRASVWEDALKMLQQDLQNDVYKTLRISYDGLRDMEKAIFLDIACFFKGKPKDHVTQILKKCGLNPLIAIDVLIEKSLITDDGWHLRMHDLLQEMGRNIVLHESLNDASKRSRLWSVKDIDQVLRSNKGTESTQAVVLSLPDPEAFEASWNPEAFAKMGNLRLLMILNKLQLPLGLKCLPSGLKVLVWREYPLESLPVGDQSNELVDLDMCHSKIKHLWRGMKLLENLKTINLRNSKNLHQTPDFTGIPNLEKLDLEGCINLVEVHASLGLLKKLSYVTLEDCKNLKSLPGKLEMNSLKLLILSGCTAVRKLPDFGESMTNLSILALDEISIAELPPTIGYLTGLHSLVLRECKNIVSLPNTFSKLKSLKRLNLSGCSKFSKLPDNLHENEALECLNVSDSAIREVPPSIVHLKNLVLLLFHGCKGIAWTSESSRLPLGKFFRFGTHTMPKKLILPSFSGLSSLKKLDLSYCNLYDESIPDDLGCLSSLVTLDLSGNNFVNLRDGCISKLSKLERLELKSCQNLQSLPKLPPNVHFVNASDCGSMEPLSNPQEIWGHLASFAFDKLQDASPIKTLLVSPGNEIPSTFFYQNYFDRDIQYLKDNYIWADSTVSISTDIAQLCQRYDRSEWWGMLVCLVVEDVASSTPSQDYRVGWISKVPATTNNILGQLCQKLLEHGFISGVPNSKHPHLLVLYIPVPSSRWCYVQDKFQLIFFSSSLKSKLVIKKCGWRVLCKEDAQLMRKSLPECSTSSANQCVSRGNCLSSPLTSWRWISHLKVPRCFKTFLLAVLCERLPTIAKCRFCTMEATTTIHVLRDCRRACAIWVQMVPPQVREEFFSISLHDWMHRFLQKSWLPNNCEDYDADCLRFSVTTFLLWKDGNNSIPEGDSLTDNGLYSMIKSLVQEHTSPTRHFIKLNVDSCCMENPRNAGYGGLFRDVEGNWLGGFYGSLGFATNMKAELYAICQGLITAWDLGYKNMLVETDSLEAINHIEEANIEHDAYRSLVADIRSLMKRNWSLNLVHSLREDNACADILSRLGAEQHEVYCFHAYPPQQLQRALIADALRVQLPSM 1511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi54g00029 1511 MobiDBLite consensus disorder prediction 1 15 - -
Vivi54g00029 1511 Gene3D - 220 384 IPR027417 -
Vivi54g00029 1511 MobiDBLite consensus disorder prediction 41 60 - -
Vivi54g00029 1511 Gene3D - 391 475 IPR042197 -
Vivi54g00029 1511 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 91 756 IPR044974 GO:0006952
Vivi54g00029 1511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 222 485 IPR027417 -
Vivi54g00029 1511 Gene3D - 1353 1481 IPR036397 GO:0003676
Vivi54g00029 1511 MobiDBLite consensus disorder prediction 40 60 - -
Vivi54g00029 1511 Pfam Reverse transcriptase-like 1357 1476 IPR002156 GO:0003676|GO:0004523
Vivi54g00029 1511 Gene3D Ribonuclease Inhibitor 578 755 IPR032675 -
Vivi54g00029 1511 Gene3D Ribonuclease Inhibitor 756 1004 IPR032675 -
Vivi54g00029 1511 ProSiteProfiles RNase H type-1 domain profile. 1350 1480 IPR002156 GO:0003676|GO:0004523
Vivi54g00029 1511 SUPERFAMILY Ribonuclease H-like 1352 1482 IPR012337 -
Vivi54g00029 1511 SMART LRR_typ_2 808 832 IPR003591 -
Vivi54g00029 1511 SMART LRR_typ_2 903 927 IPR003591 -
Vivi54g00029 1511 SMART LRR_typ_2 928 951 IPR003591 -
Vivi54g00029 1511 SMART LRR_typ_2 761 784 IPR003591 -
Vivi54g00029 1511 CDD RNase_H_like 1356 1476 IPR044730 -
Vivi54g00029 1511 MobiDBLite consensus disorder prediction 1 23 - -
Vivi54g00029 1511 PRINTS Disease resistance protein signature 257 272 - -
Vivi54g00029 1511 PRINTS Disease resistance protein signature 426 440 - -
Vivi54g00029 1511 PRINTS Disease resistance protein signature 806 822 - -
Vivi54g00029 1511 PRINTS Disease resistance protein signature 333 347 - -
Vivi54g00029 1511 Pfam NB-ARC domain 247 475 IPR002182 GO:0043531
Vivi54g00029 1511 SUPERFAMILY L domain-like 529 970 - -
Vivi54g00029 1511 FunFam Disease resistance protein (TIR-NBS-LRR class) 393 475 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi54g00029 208 863 WRKY Transcription Factor Family AT4G12020 33.828 1.81e-87 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi54g00029 - - vvo:131622857 2976.42