Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi54g00001 ATGGAATGTTGTAGCCAAAAAAAGTTTGATAGAATGAAACCAATCATAGCTGTTGTGTTCTTGCAAATTGGATATGCTGGTATGGATGTTTTATCCAAAGCTGCACTGAACAAAGGAATGAGCAATTATGTACTCGTTGTTTATCGTCACGCCGTCGCCTTCGTCGTGATTGCTCCTTTTGCACTGATCTTAGAAAAGAAAGTTAGGCCAAAGATGACATTTTCAATCTTTATGAAGCTAGTGGCTCTCAGTACACTAGAGCCGGTAATCGATCAGAATTTATATTTCTTGGGAATGAAGTATACAACGGCTACTTTTGCGGTCGCTATGTTCAATGTCCTCCCTGCCATAACTTTCGTCATGGCTTGTATTTTCAAACTTGAGAAGATAAAAATGAAAAGTGTACATAGTCAAGCAAAGGTGGTTGGAACATTAGCAACAGTTGCAGGTGCTATGGTTATGACATTGTTAAGAGGTCCAATACTTAATATTTTTGGGACACATGGAAACAGTGATCAAATCCAACATAATAGTGGAGCAAATCTTCAACATGCAATAAAGGGATCTATTATGATCACAATTGGTTGTTTTAGTTGTGCTTGTTTCATGATTCTACAAACAATAACACTTGAAACATATCCGGCTGAGTTGTCACTTACAGCATGGATATGTTTATTGGGAACAGTTGAAGGTGGCATAGTGGCTTTGATTATGGAAAGGGGTGATTATTCTGTTTGGTCTTTGAATTGGGATACAAAACTTTTGGCTGCGGTTTATAGTGGTATAGTTTGTTCAGGAATGGCCTATTACATCCAAGGAGCTGTTATGAGATATAGAGGACCAGTTTTTGTAACAACTTTCAATCCTCTCTGTATGGTCATTGTAGCTATCATGAGCTCTATCTTTTTGGCCGAGAAAATATTCCTCGGAAGGGTGATCGGCGCGGTTGTGATTATTTTAGGATTGTATTTAGTGGTGTGGGGTAAAAGCAAAGATTATGACACACCAAATTCAATTATTAAAGATGAAGCATTACCAGTTAAGGAAAGTACAGTGAGCAATGAGAAAGTGGAGAATCCTAATCCTAATCATGAAGTCATCACTAGCAGTAATTTTGCTGCAATAAAAGATCAAGATGAACAAGTGTGA 1149 0.3777 MECCSQKKFDRMKPIIAVVFLQIGYAGMDVLSKAALNKGMSNYVLVVYRHAVAFVVIAPFALILEKKVRPKMTFSIFMKLVALSTLEPVIDQNLYFLGMKYTTATFAVAMFNVLPAITFVMACIFKLEKIKMKSVHSQAKVVGTLATVAGAMVMTLLRGPILNIFGTHGNSDQIQHNSGANLQHAIKGSIMITIGCFSCACFMILQTITLETYPAELSLTAWICLLGTVEGGIVALIMERGDYSVWSLNWDTKLLAAVYSGIVCSGMAYYIQGAVMRYRGPVFVTTFNPLCMVIVAIMSSIFLAEKIFLGRVIGAVVIILGLYLVVWGKSKDYDTPNSIIKDEALPVKESTVSNEKVENPNPNHEVITSSNFAAIKDQDEQV 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi54g00001 382 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020
Vivi54g00001 382 Pfam EamA-like transporter family 13 154 IPR000620 GO:0016020
Vivi54g00001 382 PANTHER WAT1-RELATED PROTEIN 13 333 IPR030184 GO:0016020|GO:0022857
Vivi54g00001 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Vivi54g00001 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 331 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi54g00001 10 381 Nodulin-like Gene Family AT2G37460 62.834 1.26e-169 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi54g00001 - - gmx:100806461 575.474