Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi548g00002 ATGGCTGATTCAAATTCAGATTCAGTTTCTTCAAAGAGAATGTGGTGTTCAATTCCTGAAAGGTTTCAACTGCATGCTGCCATGTTGGCTCTACAATTTGGTTATGCTGGCTTTCATGTTGTCTCAAGAGCTGCCCTTAATATGGGAATTAGCAAATATGTGTTTCCTGTCTATAGGAACATTATAGCTCTTATTGTACTTCTTCCCTTTGCATATTTCTTTGAAAAGAAGAAGAGACCACCAATTAATTTCAACTTTCTCTGCCAATTCTTTTTTCTAGCACTGGTTGGGATTACAGCAAACCAAGCATTCTACTTGCTTGGTTTGGAGAACACAAGTCCAACCTTTGCATCAGCTGTACAAAACTCTATCCCTGCCATAACATTTCTGATGGCAGTAATTCTAAGAATAGAGCGAGTCAAGATTAACAGAAAAGATGGATTGGCAAAAGTAGCAGGAACAATATTATGTGTAATTGGTGCAACAATAATTACATTATACAAAGGTCCAATCATATATACTCCAAGTAGACACTTAAATAACACTTCAACAATGATAACTCAAGTAACAACAACAACAACACCAATAATTGATTTTTGGAAAATGTCACTTGGTGATGCTAAGGGAAAAAATTGGACACTTGGTTGTGTTTATCTTTTTGGACATTGTTTATCTTGGTCTGCTTGGCTTGTGTTTCAAGCACCTATTCTTCAGAAGTTTCCAGCCCGTCTTTCTCTCACTTCTTATACATGTTTCTTTGGTCTCTTGCAATTCCTTCTCATCGCTTTGGTTTGCGAAAGAAATTCGCACGCTTGGTTATTTACCTCAAGCGGCGAAGTTTTCACTATGTTATACGTCGGAGTGGTGGCATCTGGAATTGCATCTGCAGTACAAACTTGGTGTATTGATAAACAAGGTCCTGTGTTTGTTGCTATATATCAACCTATTCAAACTTTTGTTGTTGCTTTCATGGCTTCTATTGCTTTAGGAGAAGAGTTCTACTTGGGAGGGATCATTGGTGCAATATTGATTGTAGCCGGACTATACCTTGTTTTGTGGGGTAAAAATGAAGAGAGTAAATTTTCAAAGGAAAATATTGCAATTGCACCACCCACTACAGAACATAGAAACATTACATCCACAAGTATTGCTAAGGAATCATCACTTAATCAACCATTTATCTCTTCATCAACGGAAATTGTTTGA 1206 0.3715 MADSNSDSVSSKRMWCSIPERFQLHAAMLALQFGYAGFHVVSRAALNMGISKYVFPVYRNIIALIVLLPFAYFFEKKKRPPINFNFLCQFFFLALVGITANQAFYLLGLENTSPTFASAVQNSIPAITFLMAVILRIERVKINRKDGLAKVAGTILCVIGATIITLYKGPIIYTPSRHLNNTSTMITQVTTTTTPIIDFWKMSLGDAKGKNWTLGCVYLFGHCLSWSAWLVFQAPILQKFPARLSLTSYTCFFGLLQFLLIALVCERNSHAWLFTSSGEVFTMLYVGVVASGIASAVQTWCIDKQGPVFVAIYQPIQTFVVAFMASIALGEEFYLGGIIGAILIVAGLYLVLWGKNEESKFSKENIAIAPPTTEHRNITSTSIAKESSLNQPFISSSTEIV 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi548g00002 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 58 168 - -
Vivi548g00002 401 Pfam EamA-like transporter family 214 352 IPR000620 GO:0016020
Vivi548g00002 401 Pfam EamA-like transporter family 28 165 IPR000620 GO:0016020
Vivi548g00002 401 PANTHER WAT1-RELATED PROTEIN 26 364 IPR030184 GO:0016020|GO:0022857
Vivi548g00002 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 259 356 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi548g00002 6 401 Nodulin-like Gene Family AT1G75500 64.662 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi548g00002 - - vvo:131608193 668.307