Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi547g00039 ATGAAAAACACCGACCATTATGATTCGTACGACTATCGATGCCGTGACAGTGGTACATCTGATTCTGAATCCGACAATGGTCGGGATGACAGTAATTCGGTGTCCAGTGCGTACCAAGGTTCAAGTGATGGTGATGGCGATGGCGATGGTGATAGTCACGGTGAAAAATTTGTTGAATTTGATGCAGTTGTAGGTGATAGAACAGTGAAAATTAATGCCCTTACTGCTGATGAAATTCGTGCTATGGAATTCGGTACAGTTGATGAAGCTAATGTGTTTTATTTCAAGTATGCTAAATGTAAAGGGTTTGCCATTAGGAAAAGTGATGTTAGGACAAGATCGACTGAGGATGGACAAACAATTATAATGAGGCAGTTTGTATGCAATAAACACGGTCTAAGAGATACAAAACACTTAAGGAGGCTTGATAGAAAAAGAGAACACAGACCTACGACCCGCACTAATTGTCCCGCTAGGCTTCGTGTGCATTACAACCCCCAGAAGGATATTTATGTAGTGACATGTTTTGAAGAGGCTCACAACCATGAATTAACACCATCTAGGTTTGTCCACTTACACCCCATTTATCGTGAGATTACTGCAGCAGATAGAGCTCAAATTGACGGTCTACAGTCAAATGGAATTAGAACTTGTCATATAATGGGGTACATGGTTGCTCAGAAGGGTGGACACGATCGTGTTGGGTTTACAAAGAAGGATCTGTACAATTATTTTGATAGTAAAATGCGTGCTAATATTAAAGATGGTGACGTTGCCGCTGCTATAAATTATCTAACTGTGAAGTCATCTACTGATCCCATGTTATATGGTAAATATGCCGTAGACATGGATGGACGAATGAAGTCTCTTTTTTGGGCTGATGGAAGCAGTAGATCTGACTATTTTTGTTTTGGCGATGTGATTGCGTTCGACACGACTTACAAGAAGAACAAATACAACTACCCATTGGTTATATTTTCAGGGTGTAACCACCACTCTCAGACAGTTATTTTTGGTGCTGCGTTGGTGTCAGATGAAACGACAGAGACGTATAAGTGGTTGTTGGAGTGTTTTTTAGAGTGCATGGAAAATAGATACCCAGCAGCAGTTGTAACAGACGGAGATGGGGCGATGAGGGAATCTATAAAACAGGTGTTTCCGGATGCGACACATCGTTTATGCGCTTGGCATTTGAACAAGAATGCGTCTGAGAATGTAAAGAACTCGGCATTTTTGAAAGATTTTCAAAAAGCCATGTACTCTAATTTTACAAAGGATCAATTTGAAGAGTTTTGGTCAAAAATAATTAAAGAAAACGGACTTGAAGGAAATCCTTGGGTTGCAAAAACGTACGAGAACAGGTCACTATGGGCAACTGCATATCTACGTGAGAAGTTTTTTGGACGTATAAGAACTACGTCTCAATGTGAAGCCGTCAATGCAGTCATCAAGAGTTATGTCAGGAAGAAAGGCTGCATTTTTGAATTTATGCACAATTTTGATCAGGCTATGAGATCTTATAGAAACAATGAACTGATTGCCGATTATAAATCAAAGTTTTCAGAACCTGTGATGACTACTCAACTGCGTGCCCTTGAGAGCCATGCTGCGAATGTTTATACTATGGAGATTTTCAAGGAAGTCAGAGATGAAATAGTGAAGGCTGGATCATTGATTGTTAAGGAAAAGTTAATTCGCAACGGATTTAAGACTTATCGATTTACAAAATATTGTTGTGATAACTATGACGTAGAGGTTGTGTATGATGGTGAAACACTTCAATGTGAGTGTAGGTTATGGGATTCTCATGGGATTCCATGTTCTCATATGTTTGGTGTCATGAAGGAAGAACATGTTAGTCTCATTCCCACCGGTTTGATTTTGTCGAGATGGACGAAGGATGCAAAAATTCAGTACTTGAACGTGAATTGTAATGGTTCTGATGATTCTAAAATGATTGAGCTAGCTCGGTTTGGTGCATATTGTTCTGCATTTACTGCCTTTTGCAATGAAGCTTCAAAAAGGGAAGGTGTTTATGGGGAAATAATGGGTGACATTCTGAAGTTACACAAAAAGTATTGCAGTACGGACGATCCTATTTTGGCATCGAACTCAGTTGTAGGTGATCCAAATATTGTGAATAGCAAAGGTGCTCCAAAGAAAAGAAAGAATGACATAAAATCTATTAGGCGATGTTCTAAATGCAACAGTAGAACTCATAATGCAAGGAGTTGTTCGGTTGCGGAAAACGCGCCATCTGAACAAAATGTTGGTATGACGTCGCGGCCAGTAACTGATTCATTCAGCCAGGTTGTGAAGAACAAGAATGGAAAAAGAGGTCGCATTGGTGGAAGTAGTGTGCAAAATAAATGTACAGAACCACCGAACTCTCGTGGCGCGAATGTGACAGCGACTTCTCGTGCGGAAGTTGGAAGCACAAGCATACCCATGCCTGCAATGTATGGATTGCAACCCGTGTTGCCAGCGGTACAACCGATGTTGCATCCAATGCATGTACAACCGTTAATCCCACTATATCCAACGACAGTTGCGGAAAATTCGGGTTCGTGTTTCGGTAGGCCACAACGACTGATGAACAATGGTGGTACTTGA 2613 0.4068 MKNTDHYDSYDYRCRDSGTSDSESDNGRDDSNSVSSAYQGSSDGDGDGDGDSHGEKFVEFDAVVGDRTVKINALTADEIRAMEFGTVDEANVFYFKYAKCKGFAIRKSDVRTRSTEDGQTIIMRQFVCNKHGLRDTKHLRRLDRKREHRPTTRTNCPARLRVHYNPQKDIYVVTCFEEAHNHELTPSRFVHLHPIYREITAADRAQIDGLQSNGIRTCHIMGYMVAQKGGHDRVGFTKKDLYNYFDSKMRANIKDGDVAAAINYLTVKSSTDPMLYGKYAVDMDGRMKSLFWADGSSRSDYFCFGDVIAFDTTYKKNKYNYPLVIFSGCNHHSQTVIFGAALVSDETTETYKWLLECFLECMENRYPAAVVTDGDGAMRESIKQVFPDATHRLCAWHLNKNASENVKNSAFLKDFQKAMYSNFTKDQFEEFWSKIIKENGLEGNPWVAKTYENRSLWATAYLREKFFGRIRTTSQCEAVNAVIKSYVRKKGCIFEFMHNFDQAMRSYRNNELIADYKSKFSEPVMTTQLRALESHAANVYTMEIFKEVRDEIVKAGSLIVKEKLIRNGFKTYRFTKYCCDNYDVEVVYDGETLQCECRLWDSHGIPCSHMFGVMKEEHVSLIPTGLILSRWTKDAKIQYLNVNCNGSDDSKMIELARFGAYCSAFTAFCNEASKREGVYGEIMGDILKLHKKYCSTDDPILASNSVVGDPNIVNSKGAPKKRKNDIKSIRRCSKCNSRTHNARSCSVAENAPSEQNVGMTSRPVTDSFSQVVKNKNGKRGRIGGSSVQNKCTEPPNSRGANVTATSRAEVGSTSIPMPAMYGLQPVLPAVQPMLHPMHVQPLIPLYPTTVAENSGSCFGRPQRLMNNGGT 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi547g00039 870 MobiDBLite consensus disorder prediction 781 807 - -
Vivi547g00039 870 MobiDBLite consensus disorder prediction 1 52 - -
Vivi547g00039 870 MobiDBLite consensus disorder prediction 743 807 - -
Vivi547g00039 870 Pfam FAR1 DNA-binding domain 93 185 IPR004330 -
Vivi547g00039 870 MobiDBLite consensus disorder prediction 743 774 - -
Vivi547g00039 870 MobiDBLite consensus disorder prediction 1 28 - -
Vivi547g00039 870 Pfam MULE transposase domain 307 401 IPR018289 -
Vivi547g00039 870 ProSiteProfiles Zinc finger SWIM-type profile. 582 618 IPR007527 GO:0008270
Vivi547g00039 870 PANTHER OS01G0519700 PROTEIN 79 779 - -
Vivi547g00039 870 SMART 26again6 593 620 IPR006564 GO:0008270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi547g00039 MULE 1e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi547g00039 - - vvo:131620026 1481.85