Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi547g00013 ATGGACAATCACGGCCCTCCTCGTCCATATGGATATCCAAACCCATATGCATACCCTCCTTACCCCTATCCATATCCATATTCATCATATCCACCTCCACCTCAATCTCAATCTCAATCTCAAGATCCTTCTGATCCACATCAACCTCCACCTGCAACCACTCCTTATTCACCATATCCACCAAATTCTTCATACCCCTTCAACTACAACTACTCCTATCCACCACATCCTCCAACCAACCCTTCAGAGTATCCTCCTCCTCAACAATCTCATGCTTATCCTTATCCTTACCCTTACTCTTCCTACCCTTATCCCTATCCTTACCAAGCCCTTCCAATCAAAGATGAACCAAAACCAAGCTCTCCTCATAGTGCTCCTTACCCTACTTTGAATGATCTTATGAACAATGTTCAGCTATCTGATAACAGACCAAATACACCTCCTTTATTGACACATTCCAATTCAGTTTCAACTGAAGAGAGACAAGAAGACTTTTGTGGTCATTCTAGTCGTAATTCCTTTTCAGGTTTTGAAAATTCCTACTATGATTTGGGGGGTTCTCCCAAACTTTCAGCTGCTTCATCGGATGACTCAGTGTTTAACCAGAGTTTGCAGATTGTTCCGGTTCAGAATAAAGGGTCTCTGAAGTTTTTGCTCCTGCATGGTAATTTAGATATATGTATTCATGGTGCTAAGAATCTTCCGAATATGGATATGTTTCATAAGACTTTAGATGATATGTTTGGCAAATTTCCTGGTAATGTGGGGAATAAGATTGAGGGAACAATGAGTAGGAAGATTACTAGTGATCCTTATGTGTCGATTTCTGTGTTGAATGCTGTAATTGGTAGAACTTTTGTGATTAGCAATAGTGAAAATCCTGTTTGGGAGCAACACTTTTATGTTCCTGTTGCACATGATGCTGCTGAAGTGCATTTTGTTGTTAAGGATAGTGATGTGGTTGGTTCACAACTTATTGGTGTTGTGGCGATTCCGGTGGAGCAGATATATACGGGTGAAAAGATACAAGGGACTTATCCTATCCTTAATAACAGCGGGAAGCCTTGTAAGCAAGGTGCTGTGTTGAGTATTTCCATCCAATTCATTCCAATGGACAAGCTGTCCATTTATCATCAAGGACTTGGAGCGGGGCCTGACTTTATCGGTGTGCCGGGAACATATTTTCCGTTGAGGAAAGGCGGAAATGTTACTCTATATCAAGACGCTCATGTTCCGGATGGATGCCTCCCTAATGTCATGCTTGATAATGGAATGCATTATGCTAATGGAAAGTGTTGGGCTGACATCTTTGATGCGATACAGCAAGCAAAGCGTTTGGTTTACATTACGGGGTGGTCGGTGTGGCACAAAGTTAGGCTGCTAAGGGATGCCGGTCATTCTCATGAAACGGATTTCACCCTTGGTGATCTTTTGAGGTCCAAGTCTTCCGAAGGAGTAAGAGTGCTTCTCCTTGTTTGGGATGACCCTACCTCAAGAAGCATTCTTGGTTATAAGACAGATGGTGTCATGGCAACTCATGATGAGGAAACTAGACGATTTTTCAAGCATTCTTCTGTGCAAGTGTTACTTTGTCCTCGCATTGCTGGAAAACGACATAGCTGGGCCAAGCAAAAGGAAGTTGAAACAATATATACACATCATCAGAAAACTATAATTGTGGACGCTGATGCTGGAAATAACAAAAGAAAAATTGTAGCATTTATTGGTGGACTTGATTTGTGTGACGGCCGATATGATACTCCCCACCATCCCCTCTTTAGGTCACTGCATACACTGCATAAGGATGATTATCACAACCCTACTTTCACGGGTAGTACTGGTGGCTGTCCGCGGGAACCATGGCATGACTTGCATTCTAAAATTGATGGTCCAGCAGCTTACGATATTTTGACCAATTTTGAGGAGCGCTGGTTAAGAGCTGCGAAACCTACAGGGATAAAAAAGTTTAGGAGTTCGTATGACGATGCGTTGCTCAAGATAGAAAGAATTTCAGATATTATCCCTATGTCTGACGCTCCTAGTGACGGTGATGATAATCCTGAAGCTTGGCATGCTCAGATATTTCGTTCAATTGATTCAAGCTCTGTCAAGGGATTTCCAAAGGAGCCAAAAGATGCATCAGAAAAGAATCTTGTATGCGGGAAGAATGTGCTGATAGACATGAGCATACATACAGCGTACGTGAAGGCCATTCGTGCTGCACAGCATTACATTTATATAGAGAATCAATATTTCATTGGTTCTTCATACAATTGGAGCCAAAATAAAGATATTGGTGCTAATAATTTAATTCCAATGGAGATTGCCTTGAAGATCGCTGAAAAAATAAAGGCAAATGAGAGGTTTGCAGTATACATAGTTATTCCAATGTGGCCAGAGGGTAATCCAACAGGTGCTGCCACTCAAAGGATTCTATTTTGGCAGCATAAAACAATGCAAATGATGTACGAGACAGTTTACAAGGCTTTGATCGAAGTTGGGCTTGAAGCAGCGTTCTCTCCACAAGACTATTTGAACTTTTTCTGTCTTGGAAATCGAGAAGCCATAGATATGCATGAGAATATTGTTGTGTCTGGAATTCCTCCCCCACCAAATACTCCACAAGTACATAGTCGAAATAACCGGCGGTTCATGATTTATGTTCATTCAAAAGGCATGATTGTTGATGATGAATATGTGATATTGGGATCCGCAAACATTAATCAGCGCTCTATGGAAGGAACAAGGGACACTGAGATTGCAATTGGAGCTTACCAACCTCAATATACCTGGGCGAAAAATCAGTGTTATCCACGTGGACAGGTTCATGGATACAGAATGTCACTTTGGGCAGAGCATACGGGCACCGTCGAAGACTGTTTCTTACAACCAGAGAGCCTGGAATGTGTGAGAAGGGTTAGAACGATGTCCGAAATGAACTGGAATCAATTTGCATCAAATGATTTGACTGAGATGAGAGGACATTTAATAAAGTACCCTGTAGAAGTTGATAGAAAGGGTAAGGTTAGATCTCTTCCTGGTCATGAAGAGTTCCCTGATGTTGGAGGAAAGATTATAGGATCCTTTATTGCCATTCAAGAGAATCTAACCATTTGA 3117 0.4164 MDNHGPPRPYGYPNPYAYPPYPYPYPYSSYPPPPQSQSQSQDPSDPHQPPPATTPYSPYPPNSSYPFNYNYSYPPHPPTNPSEYPPPQQSHAYPYPYPYSSYPYPYPYQALPIKDEPKPSSPHSAPYPTLNDLMNNVQLSDNRPNTPPLLTHSNSVSTEERQEDFCGHSSRNSFSGFENSYYDLGGSPKLSAASSDDSVFNQSLQIVPVQNKGSLKFLLLHGNLDICIHGAKNLPNMDMFHKTLDDMFGKFPGNVGNKIEGTMSRKITSDPYVSISVLNAVIGRTFVISNSENPVWEQHFYVPVAHDAAEVHFVVKDSDVVGSQLIGVVAIPVEQIYTGEKIQGTYPILNNSGKPCKQGAVLSISIQFIPMDKLSIYHQGLGAGPDFIGVPGTYFPLRKGGNVTLYQDAHVPDGCLPNVMLDNGMHYANGKCWADIFDAIQQAKRLVYITGWSVWHKVRLLRDAGHSHETDFTLGDLLRSKSSEGVRVLLLVWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVQVLLCPRIAGKRHSWAKQKEVETIYTHHQKTIIVDADAGNNKRKIVAFIGGLDLCDGRYDTPHHPLFRSLHTLHKDDYHNPTFTGSTGGCPREPWHDLHSKIDGPAAYDILTNFEERWLRAAKPTGIKKFRSSYDDALLKIERISDIIPMSDAPSDGDDNPEAWHAQIFRSIDSSSVKGFPKEPKDASEKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQNKDIGANNLIPMEIALKIAEKIKANERFAVYIVIPMWPEGNPTGAATQRILFWQHKTMQMMYETVYKALIEVGLEAAFSPQDYLNFFCLGNREAIDMHENIVVSGIPPPPNTPQVHSRNNRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAIGAYQPQYTWAKNQCYPRGQVHGYRMSLWAEHTGTVEDCFLQPESLECVRRVRTMSEMNWNQFASNDLTEMRGHLIKYPVEVDRKGKVRSLPGHEEFPDVGGKIIGSFIAIQENLTI 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi547g00013 1038 SMART pld_4 884 911 IPR001736 GO:0003824
Vivi547g00013 1038 SMART pld_4 549 584 IPR001736 GO:0003824
Vivi547g00013 1038 MobiDBLite consensus disorder prediction 26 92 - -
Vivi547g00013 1038 FunFam Phospholipase D delta 423 663 - -
Vivi547g00013 1038 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 549 584 IPR001736 GO:0003824
Vivi547g00013 1038 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 884 911 IPR001736 GO:0003824
Vivi547g00013 1038 SUPERFAMILY Phospholipase D/nuclease 419 648 - -
Vivi547g00013 1038 Gene3D C2 domain 218 363 IPR035892 -
Vivi547g00013 1038 PANTHER PHOSPHOLIPASE D 212 1028 IPR015679 -
Vivi547g00013 1038 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 215 371 IPR035892 -
Vivi547g00013 1038 FunFam Phospholipase D delta 217 364 - -
Vivi547g00013 1038 ProSiteProfiles C2 domain profile. 196 346 IPR000008 -
Vivi547g00013 1038 Pfam Phospholipase D C terminal 958 1028 IPR024632 -
Vivi547g00013 1038 Gene3D Endonuclease Chain A 697 937 - -
Vivi547g00013 1038 Gene3D Endonuclease Chain A 420 666 - -
Vivi547g00013 1038 MobiDBLite consensus disorder prediction 26 62 - -
Vivi547g00013 1038 SUPERFAMILY Phospholipase D/nuclease 707 970 - -
Vivi547g00013 1038 SMART C2_3c 223 345 IPR000008 -
Vivi547g00013 1038 MobiDBLite consensus disorder prediction 71 92 - -
Vivi547g00013 1038 CDD C2_plant_PLD 218 369 - -
Vivi547g00013 1038 Pfam C2 domain 222 348 IPR000008 -
Vivi547g00013 1038 Pfam Phospholipase D Active site motif 550 584 IPR001736 GO:0003824
Vivi547g00013 1038 Pfam Phospholipase D Active site motif 885 911 IPR001736 GO:0003824
Vivi547g00013 1038 FunFam Phospholipase D 697 930 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi547g00013 12 1038 Phospholipase D Gene Family (Wang group) AT2G42010 66.667 0.0 1400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi547g00013 K01115 - gmx:100805294 1587.01