Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi546g00017 ATGGAGCATATTAATAATGAGGAAATTCCATCAGCACCAGCAACACCAGGCACTCCAGGTGTACCTCTTTTTGGTGGTTTTAAGTCAGAGAGAAATGAGCATAGTAGTAATAAGAAAAAAAAGTCCCTCCTGAAGAATTGTCAATGCTTTGGTGTCAAAGAATGGACCTTAGAAGACGGAGCTCTACCCACAGTCACTTGCTCATTAATGGCACCCCCTCCTGTCCCTCTTGCAAAAAAGATAGGAGCTGAGTTTATAGGGACATTGATTCTGATGTTTGCTGGCACAGCCACTGCTATTGTGAACCAAAAGACAAATGGGTCGGAGACTCTGATTGGATGTGCTACCTCTACTGGTCTTGCCGTTATGATCATCATCCTTTCCACCGGCCACATCTCTGGTGCTCATCTCAACCCTGCAGTCACTATTTCCTTTGCTGCGTTGAAGCACTTCCCGTGGAAGCATGTGCCTTTGTATATTGGAGCACAAGTTTTGGCATCAATATGTGCCGCATTTACTCTCAAAGGGGTTTTTCACCCTTTCATGAGTGGTGGAGTCACCGTTCCTTCCGGGGGATATGGCCAAGCTTTTGCTTTAGAGTTCATTATCAGCTTTAACCTCATGTTTGTTGTCACCGCAGTGGCCACTGACACAAGAGCCGTAGGAGAACTAGCAGGAATTGCGGTGGGAGCAACTGTGATGCTCAATATACTCATAGCAGGGCCAATAACAGGAGCGTCCATGAACCCAGTAAGAACTCTAGGTCCAGCTATTGCTGCAAACAACTACAAAGCCATATGGGTCTATCTATTAGCTCCCATACTTGGAGCTCTAGGTGGGGCAGGTACTTATACCGCAGTCAAGCTACCCGAAGAAGACGATAAGACAAAGTCTAATGCTTCTTCAAACCACCCCAGCTTCACAAGACGATGA 933 0.462 MEHINNEEIPSAPATPGTPGVPLFGGFKSERNEHSSNKKKKSLLKNCQCFGVKEWTLEDGALPTVTCSLMAPPPVPLAKKIGAEFIGTLILMFAGTATAIVNQKTNGSETLIGCATSTGLAVMIIILSTGHISGAHLNPAVTISFAALKHFPWKHVPLYIGAQVLASICAAFTLKGVFHPFMSGGVTVPSGGYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPITGASMNPVRTLGPAIAANNYKAIWVYLLAPILGALGGAGTYTAVKLPEEDDKTKSNASSNHPSFTRR 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi546g00017 310 MobiDBLite consensus disorder prediction 1 37 - -
Vivi546g00017 310 PANTHER AQUAPORIN NIP2-1 41 298 IPR034294 -
Vivi546g00017 310 SUPERFAMILY Aquaporin-like 76 294 IPR023271 -
Vivi546g00017 310 Pfam Major intrinsic protein 77 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi546g00017 310 ProSitePatterns MIP family signature. 136 144 IPR022357 -
Vivi546g00017 310 PRINTS Major intrinsic protein family signature 118 142 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi546g00017 310 PRINTS Major intrinsic protein family signature 199 217 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi546g00017 310 PRINTS Major intrinsic protein family signature 230 252 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi546g00017 310 PRINTS Major intrinsic protein family signature 267 287 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi546g00017 310 PRINTS Major intrinsic protein family signature 79 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi546g00017 310 PRINTS Major intrinsic protein family signature 155 174 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi546g00017 310 Gene3D Glycerol uptake facilitator protein. 71 301 IPR023271 -
Vivi546g00017 310 CDD MIP 79 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi546g00017 310 FunFam Aquaporin NIP2-1 67 299 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi546g00017 4 301 Major Intrinsic Protein MIP AT1G80760 77.888 4.48e-166 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi546g00017 K09874 - gmx:100815637 483.796