Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi545g00028 ATGGCGGCAACTTCAGAAGCTATGAACCAATTCGACGAATCGATGAAGAAACAAATCGCAGTAATTTTGAAGGTTGTGCTTTTGAATAAATCCCTAAAAGAGGATAATATTCCATGCGAAATTGATGAGGGTTTATTTTTGGGTTCGATTGGTTCTGCGAGGAACAAGGTTGCTTTGAAGAATGTCAATGTTACACATATTTTGACTGTGGCTGGGAAACATGCACCTGCACATCCTGGAGATTTTGTTTATAAAGTTATAGATGCTGCTGACAAAGAGGATACCAACTTAAAACAATACTTCAATGAGTGTTTTGAATTTATCGACGAAGCCAAAAAAAATGGAGGATATGTTTTGGTTCACTGTTTTGCTGGAAGATCAAGGAGTGTGACTATCATTGTGGCATATCTGATGAAGACTCGTGGAATGAGCTTATCTGAAGCTCTGCAACATGTAAAAAACAAAAGACCAAAGGCTGCTCCTAATCGAGGTTTCGTTCGGCAACTGGAAGAATTTGAGAAATCTCTTCAAGGTCAGGCTCTAGTTTGA 549 0.388 MAATSEAMNQFDESMKKQIAVILKVVLLNKSLKEDNIPCEIDEGLFLGSIGSARNKVALKNVNVTHILTVAGKHAPAHPGDFVYKVIDAADKEDTNLKQYFNECFEFIDEAKKNGGYVLVHCFAGRSRSVTIIVAYLMKTRGMSLSEALQHVKNKRPKAAPNRGFVRQLEEFEKSLQGQALV 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi545g00028 182 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 99 157 IPR000387 GO:0016311|GO:0016791
Vivi545g00028 182 SMART dsp_5 37 175 IPR020422 GO:0006470|GO:0008138
Vivi545g00028 182 Pfam Dual specificity phosphatase, catalytic domain 45 174 IPR000340 GO:0008138|GO:0016311
Vivi545g00028 182 Gene3D Protein tyrosine phosphatase superfamily 39 182 IPR029021 -
Vivi545g00028 182 ProSiteProfiles Dual specificity protein phosphatase domain profile. 37 178 IPR020422 GO:0006470|GO:0008138
Vivi545g00028 182 CDD DSP 38 171 - -
Vivi545g00028 182 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 35 178 IPR029021 -
Vivi545g00028 182 FunFam Dual specificity phosphatase 12 39 180 - -
Vivi545g00028 182 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 32 176 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi545g00028 40 180 Protein tyrosine phosphatase (PTP) family AT3G06110 57.447 1.22e-58 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi545g00028 - - lang:109352945 262.692