Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi545g00012 ATGTCTGGTCATGATGTCGAGAAAATTCAAGAGCTTCAGTTATTCACAACACCGCAATTGCAAACCCAAACACAAAATATTAATACCACCATAGACAACAACAACCCTGAATCACCTTCCACTGTTGTCCGCCGCCCCCGAGGTCGTCCAGTTGGCTCTAAGAATAAGCCCAAGACGCCTATCATAGTTACATGTGAAAACCCGAATGCCCTATGTCCTCATGTGCTTGAGATCACTGATGGAGCTGACGTGTTAAAAAGTCTCTTTGATTACGCTCGTCGTCAACTAAGGGGGGTCTCCATCCTCAATGGAAATGGAGTGGTGACGCATGCTAGGCTTCGTCAACCCACGGGAAGAGTCATAACCCTTCAAGGAAATTTTGAGATTCTTTCCATATTTGGGACAATTTTTCCGCCACCAACACCTGAGATGGTTGGAGGATTAAGAGTTCACTTATCAGGAACAAAAGGACACATGATTGAGGGTAGTGTGATTCCCCCATTGATGGCTTCAGGTCCAGTGACTTTGACGGCTGTTTCCTTTGCAAACATTGTTCCTGAAAAGATTTCTTCGATGGGGAATGATTAG 588 0.4507 MSGHDVEKIQELQLFTTPQLQTQTQNINTTIDNNNPESPSTVVRRPRGRPVGSKNKPKTPIIVTCENPNALCPHVLEITDGADVLKSLFDYARRQLRGVSILNGNGVVTHARLRQPTGRVITLQGNFEILSIFGTIFPPPTPEMVGGLRVHLSGTKGHMIEGSVIPPLMASGPVTLTAVSFANIVPEKISSMGND 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi545g00012 195 MobiDBLite consensus disorder prediction 27 58 - -
Vivi545g00012 195 CDD DUF296 73 181 IPR005175 -
Vivi545g00012 195 Gene3D - 73 192 - -
Vivi545g00012 195 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 26 188 IPR014476 GO:0003680
Vivi545g00012 195 MobiDBLite consensus disorder prediction 27 41 - -
Vivi545g00012 195 Pfam Plants and Prokaryotes Conserved (PCC) domain 73 182 IPR005175 -
Vivi545g00012 195 PIRSF ESCAROLA 3 191 IPR014476 GO:0003680
Vivi545g00012 195 ProSiteProfiles PPC domain profile profile. 68 195 IPR005175 -
Vivi545g00012 195 SUPERFAMILY AF0104/ALDC/Ptd012-like 69 188 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi545g00012 44 183 AT-hook Motif Nuclear Localized (AHL) Family AT3G60870 56.429 1.73e-46 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi545g00012 - - psat:127135174 285.034