Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi541g00008 ATGAAGAAGAAACCAGTGTTCCCCTTTTTTCTCCTTATCATCTCCTTCTCTTTGCACACCTACCATCCACTTTCTGCTTTGACCATCATCTCACCAACCCAATCTCTCTCTGGTGATCAAACTCTTGTTTCCAAAGATGGCATCTTTGAATTGGGTTTCTTTAATATAGGTAATTCCTCTAACTATTACATAGGCATGTGGTACAAAAAGATATCTATAAGGACATATGTTTGGATAGCAAATAGAGATGACCCAGTTTCTGATAAAAGTGCTTCCAAGTTAGCTATTTCTGATGGTAATTTAGTTCTCTTGGATCAGTCTCAAACTCTAGTTTGGTCAACAAATTTGAGTTCTACTGGTTCAAATTCTGTACTTGCTGTCCTTTTAGATACAGGTAATCTTATATTGAGTAACAGTCCTAATGCATCAGAATCAGAAGCTTTGTGGCATAGTTTTGATTTTCCAACAGATACATGGCTTCCTGGTGGCAAACTTAAACTTGATAAGATAACAAACAAGACTCAGCATCTTACTGCATGGAAGAACAGCAAAGATCCATCAACTGGTTTGTTCTCTCTTGAACTAGATCCTAATGGAACCAACTCATATTTGAGTTTTTGGAATAACACTCAACAGTATTGGACAAGTGGTTCTTGGAATGGCCAAATATTCCCCATGGTTCCTATAATGTGGTCAAACAACATCTTCAATTTCTCCTTTGTGTCGAACGAAAACGAGAGCTATTTTACCTTCTCTTTACAGAATAATTCTACTATATCCCGTTTCGTGATGGATGTGTCGGGGCAGATCAAGCAGTTTACTTGGCTCGAAAGTACTCAGCAATGGAATTTGTTTTGGTCACAGCCAAGAGGGCAGTGTCAGGTTTATGCTTTCTGTGGTGCATTTGGTAGCTGCAATGAGATATCAAAGCCATACTGCAATTGTTTGAATGGTTATCAACCAAAGTCACAATCTGATTGGGATCTTGGTGATTACTCGCATGGCTGTGTGAAAACAAACAAATTTCAATGTGAGCTATCTTCTGATCCTTCTATTGGGACCAAAGATAGGTTCTTAATCAAATCGAATTTGGCTTTGCCTGAACGTGCACATCCTGTTGTGGAATCTGGTTTGAAAGATGAATGCGAGTCAACGTGTTTGAGCAACTGTTCCTGCACTGCATATGTTTATAACAGTAGCGGTTGCTTCATTTGGAGAGGAAAACTCTTAAATCTGCAACAGCTTTCTGAAGATGACAGAAATGGACAAACATTGTTTCTAAAACTTGCAGCATCTGAGTTTCATGATTCGAAAAGTAATAAAGGAACTACCATTAGTATTGTTGGTTCTGCTGTTGGTGGTATAGTGATTCTCCTTGTTCTTGTTCTAATTCTCGTGATTAGGCGAAGAAAGATACTAGCTGGAGCAAGAACTTCAGTTGAGGGTTCATTGATAGCATTTGCATACAGAGATTTGCAAAATGCAACGAATAATTTCTCTGAGAAGCTCGGAAGGGGAGGTTTTGGTTCTGTCTTCAAAGGAATATTACCATATTCTAATTTTATAGCAGTGAAGAAACTCGAAAGCATTAGCCAAGGCGAAAAGCAGTTTCGAACAGAAGTGTGTACTATTGGGATTGTTCAGCATGTCAATCTTGTTAGGCTTCGTGGTTTCTGTTCTGAAGGCGACAAAAGGCTTCTGGTGTATGATTACATGCCGAACGGGTCTTTGGATTCAAATCTGTTTAAGAACTCCAAGGTGTTGAATTGGAAAGTAAGATTCCAAATTGCTCTTGGAATAGCTAAAGGACTGACATATCTTCATGAACAGTGTAGAGAGTGTATCATTCACTGCGACGTGAAGCCAGAAAACATTCTCATAGACTCTGAATTCTGTCCAAAGATTGCAGACTTCGGCCTTGCAAAACTTGTTGGAAGGGACTTCAGCAGGGTCCTAACTACCATCAGAGGAACATTAGGCTATTTAGCTCCAGAATGGATTTCTGGAGTGGCTATAACTGCTAAAGCCGATATTTACAGCTACGGAAAGGTGCTTTTTGAGCTTGTGTCGGGTAGAAGAAACTCGGATCCTTCTGAAGATGGCCAAATTAGTTTCTTTCCTACATTGGCAGCAAACATGTTACACCAAGGTGGGAATGTGATTAGCCTATTGGACTCAAGATTGGAGGGTGATGGTGATGTTGAGGAGATCACTAGAGTCATAAAAGTTGCTTCTTGGTGTGTTCAAGATGATGAAACTCATAGGCCATCCATGAGTCAAGTAGTTCAAATACTTGAAGGGGTGTTAGATGTTGCTTTGCCTCCTATTCCTAGATCACTTCAAGTTTTTTTTGATGACCATGAGGACATTGTTTACTTCTCTAAATCAAACTCCACTTGTAGCACATACCAGGACACGTTTTAG 2424 0.3956 MKKKPVFPFFLLIISFSLHTYHPLSALTIISPTQSLSGDQTLVSKDGIFELGFFNIGNSSNYYIGMWYKKISIRTYVWIANRDDPVSDKSASKLAISDGNLVLLDQSQTLVWSTNLSSTGSNSVLAVLLDTGNLILSNSPNASESEALWHSFDFPTDTWLPGGKLKLDKITNKTQHLTAWKNSKDPSTGLFSLELDPNGTNSYLSFWNNTQQYWTSGSWNGQIFPMVPIMWSNNIFNFSFVSNENESYFTFSLQNNSTISRFVMDVSGQIKQFTWLESTQQWNLFWSQPRGQCQVYAFCGAFGSCNEISKPYCNCLNGYQPKSQSDWDLGDYSHGCVKTNKFQCELSSDPSIGTKDRFLIKSNLALPERAHPVVESGLKDECESTCLSNCSCTAYVYNSSGCFIWRGKLLNLQQLSEDDRNGQTLFLKLAASEFHDSKSNKGTTISIVGSAVGGIVILLVLVLILVIRRRKILAGARTSVEGSLIAFAYRDLQNATNNFSEKLGRGGFGSVFKGILPYSNFIAVKKLESISQGEKQFRTEVCTIGIVQHVNLVRLRGFCSEGDKRLLVYDYMPNGSLDSNLFKNSKVLNWKVRFQIALGIAKGLTYLHEQCRECIIHCDVKPENILIDSEFCPKIADFGLAKLVGRDFSRVLTTIRGTLGYLAPEWISGVAITAKADIYSYGKVLFELVSGRRNSDPSEDGQISFFPTLAANMLHQGGNVISLLDSRLEGDGDVEEITRVIKVASWCVQDDETHRPSMSQVVQILEGVLDVALPPIPRSLQVFFDDHEDIVYFSKSNSTCSTYQDTF 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi541g00008 807 FunFam Serine/threonine-protein kinase 22 152 - -
Vivi541g00008 807 SUPERFAMILY Protein kinase-like (PK-like) 482 798 IPR011009 -
Vivi541g00008 807 Gene3D Transferase(Phosphotransferase) domain 1 572 772 - -
Vivi541g00008 807 CDD STKc_IRAK 503 767 - -
Vivi541g00008 807 SMART ntp_6 353 429 IPR003609 -
Vivi541g00008 807 Gene3D - 25 152 IPR036426 -
Vivi541g00008 807 ProSiteProfiles Protein kinase domain profile. 497 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi541g00008 807 CDD B_lectin 33 155 IPR001480 -
Vivi541g00008 807 SMART blect_4 33 155 IPR001480 -
Vivi541g00008 807 ProSitePatterns Protein kinases ATP-binding region signature. 503 526 IPR017441 GO:0005524
Vivi541g00008 807 Pfam PAN-like domain 354 411 IPR003609 -
Vivi541g00008 807 PANTHER OS07G0415500 PROTEIN 8 777 - -
Vivi541g00008 807 FunFam Serine/threonine-protein kinase 572 773 - -
Vivi541g00008 807 PIRSF SRK 2 806 IPR024171 GO:0004674
Vivi541g00008 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Vivi541g00008 807 SMART serkin_6 497 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi541g00008 807 Gene3D Phosphorylase Kinase; domain 1 465 571 - -
Vivi541g00008 807 Pfam Protein kinase domain 500 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi541g00008 807 FunFam Receptor-like protein kinase 4 465 571 - -
Vivi541g00008 807 Pfam D-mannose binding lectin 75 181 IPR001480 -
Vivi541g00008 807 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 220 IPR036426 -
Vivi541g00008 807 ProSiteProfiles PAN/Apple domain profile. 344 430 IPR003609 -
Vivi541g00008 807 CDD PAN_AP_plant 353 430 - -
Vivi541g00008 807 ProSiteProfiles Bulb-type lectin domain profile. 27 149 IPR001480 -
Vivi541g00008 807 Pfam S-locus glycoprotein domain 214 323 IPR000858 GO:0048544
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi541g00008 452 775 Receptor kinase-like Gene Family AT5G20050 40.496 1.29e-75 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi541g00008 Pkinase 9.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi541g00008 - - gmx:100305421 1141.33