Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi53g00059 ATGGCTGCAGCATCTAATCAATCCTCTTCCACTTCAGAAGAGAACTCCATCAACAACACAATGGCAATATTAATGAAGGAGAAGAATATTGTAAAACCTCGACCTACAAACTCCAAAACCTCAACTTTCAAGCTCTCCAAGGATGCTTCTTTTCGCGGGTCGAAGTTACAAGAACATGATTTTATCAACCCTACAACGAATATGGTGGAAGGTTCGTCTTCATCAAGTTTGATTAATACTAAGTCTAAGAAAGTAGACGATACTGGAAAAAAGTCGTTGAATAAATTCTCATGCAAAATTTGTAAAAATCAATTTTCATCTTGGCAAGCTTTAGGAGGGCACCAAAACGCTCATAAAAAAGAGCGTGCGTTCGCAAAACATGTCGGAGAGATAAACAACGATTTCGAGACTCTTCATCATCCTTTGCCTCACCACAACAATTATCCTAGTCTTTCTACAAGTCATTATAATGGATTTAGATTTAAACCATATAATAGACCACTTGGAATTAACATGGAATCTATGATTCACAAGCCGAGGCCAAGTTATTCATGGATCACACCTCCTTTTAATTTTTGTCCTACTTCTACTTCTGCATGGACACCAATGCAAGAGATGAAAACCTTTTCTTTTCTTGATGGATCAAAGAATGAGACTTTTAATGTAAATAATGGAAATAGTGTAACTCCAACTTTGAGGAATTTTCTAAAGAACTTAGAAGTTGGTCTTGGAGAGTCTTCAAATTCTATGGAAGAGAATTCAATTGTAGTTGGCACAAGTGATTGTGATAATCATTGCACTAATTTGGAAGAAACCTCTGAATCGGTTGAGCTTGATTTGTCACTTAAACTTTGA 855 0.3626 MAAASNQSSSTSEENSINNTMAILMKEKNIVKPRPTNSKTSTFKLSKDASFRGSKLQEHDFINPTTNMVEGSSSSSLINTKSKKVDDTGKKSLNKFSCKICKNQFSSWQALGGHQNAHKKERAFAKHVGEINNDFETLHHPLPHHNNYPSLSTSHYNGFRFKPYNRPLGINMESMIHKPRPSYSWITPPFNFCPTSTSAWTPMQEMKTFSFLDGSKNETFNVNNGNSVTPTLRNFLKNLEVGLGESSNSMEENSIVVGTSDCDNHCTNLEETSESVELDLSLKL 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi53g00059 284 ProSitePatterns Zinc finger C2H2 type domain signature. 98 118 IPR013087 -
Vivi53g00059 284 Gene3D Classic Zinc Finger 71 140 - -
Vivi53g00059 284 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 6 284 IPR044246 GO:0009788
Vivi53g00059 284 ProSiteProfiles Zinc finger C2H2 type domain profile. 96 123 IPR013087 -
Vivi53g00059 284 Pfam C2H2-type zinc finger 96 121 - -
Vivi53g00059 284 SUPERFAMILY beta-beta-alpha zinc fingers 95 124 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi53g00059 96 179 C2H2 Transcription Factor Family AT5G10970 41.573 2.21e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi53g00059 - - vvo:131605513 444.121