Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi53g00021 ATGGCGAGTTTATCTTTCTTCCAACGTCTTTCTAGAACTTTCCGTGACAATCACAGAACCGTTAAGCTTGTTCTTCTCTGCACCGCTGTAAGTGGTGGTGGAATTGTGGCATATGGTGAGTTGGCTCCGTCGGAAGCGGTTACCGATAAGAAAAAAGTGGTGGTGCTCGGAACTGGTTGGGCGGCTACGAGTTTTATGAAGAATTTGGATAATCCGAAGTATGAAGTTCAAGTTATTTCGCCTCGGAATTATTTTGCATTCACTCCTTTGCTGCCTAGCGTGACGTGCGGGACAGTTGAAGCGCGCAGCATTGTTGAACCTGTTCGCAATATTTTTAGGAAGAAAAAGGTGGACGTGCAATTCAGTGAAGCAGAATGTTTCAAGATCGATGCTGAAAATAAAAAAGTTTATTGTCGATCTAATGCAAACAATAGTTTGAACGGGAAAGAAGAATTTGTTTTGGACTATGATTACCTAATCATCGGCGTTGGCGCTAAGGTCAACACATTTAACACACCAGGAGTGGTGGAGAATTGTCATTTTCTGAAGGAAGTTGAAGATGCGCAGAAGATTAGAAGAACAGTTATCGACTGCTTTGAGAGAGCGAACTTGCCTGAAGTAAGCGAGGAAGAGAAGAAAAGAATTCTTCATTTTGCTATTGTTGGAGGTGGGCCAACTGGAGTAGAGTTTGCAGCCTCACTTCATGACTTTGTCAACGAGGATTTAGTCCGTTTATATCCCGGGATAAAAGATTTAGTAAAAATTACACTTCTGGAAGCTGGAGATCATATCTTGAGCATGTTTGACAAAAGGATAACTGCTTTTGCTGAAGACAAGTTTCATAGAACTGGGATTGATGTGAAAACAGGATCCATGGTTGTGAAAGTATCTGAGAAAGAAATTTCCACTAAAGAGCTGAAAAATGGAGGAAATATTACTACAATTCCATATGGAATGGCTGTCTGGTCAACTGGTATCGGCACTCGTCCGTTTATTAAAGATTTCATGTCACAAATTGGTCAGGCTAGCCGGCGTGCTCTAGCTACCGATGAATGGTTGAGAGTTGAAGGATGCAACAATGTATATGCACTCGGTGATTGTGCTACGATAAATCAGCGAAAAGTCATGGAAGATATTTCGGCGATCTTTAAGAAAGCTGACAAAGGCAATTCAGGAACACTTACAGTCAAAGAATTTCAAGATGTCATGAAGGACATTTGCGTACGATATCCTCAAGTTGAGCTGTATCTGAAAAGTAAACAGATGTGCAACATTGCTGATTTATTGAAGGAAGCCAAGGGAGATGTTAAAAAAGAAACAGTTGAACTGAATATCGAAGAACTCAAAACAGCTCTTTCCAAAGTGGATTCTCAGATGAAATTTCTCCCTGCAACAGCGCAGGTTGCATCTCAGCAAGGAATTTACCTAGCAAAATGTTTTAACCGAATGGAAGAGTGTGAGAAAAATCCAGAGGGTCCTCTCAGATTCAGGGGAGAAGGTCGCCATCGCTTCAATCCCTTCCGGTACAAGCACTTAGGTCAGTTCGCTCCTTTGGGAGGAGAACAGACAGCTGCCCAGCTTCCTGGGGATTGGGTTTCAATTGGTCACAGCAGTCAATGGTTATGGTATTCTGTCTATGCAAGCAAACAAGTAAGCTGGCGTACTAGGGCGTTAGTAGTTACAGACTGGACAAGACGTTTTATTTTTGGGAGAGACTCAAGCCGCATCTGA 1731 0.4229 MASLSFFQRLSRTFRDNHRTVKLVLLCTAVSGGGIVAYGELAPSEAVTDKKKVVVLGTGWAATSFMKNLDNPKYEVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIFRKKKVDVQFSEAECFKIDAENKKVYCRSNANNSLNGKEEFVLDYDYLIIGVGAKVNTFNTPGVVENCHFLKEVEDAQKIRRTVIDCFERANLPEVSEEEKKRILHFAIVGGGPTGVEFAASLHDFVNEDLVRLYPGIKDLVKITLLEAGDHILSMFDKRITAFAEDKFHRTGIDVKTGSMVVKVSEKEISTKELKNGGNITTIPYGMAVWSTGIGTRPFIKDFMSQIGQASRRALATDEWLRVEGCNNVYALGDCATINQRKVMEDISAIFKKADKGNSGTLTVKEFQDVMKDICVRYPQVELYLKSKQMCNIADLLKEAKGDVKKETVELNIEELKTALSKVDSQMKFLPATAQVASQQGIYLAKCFNRMEECEKNPEGPLRFRGEGRHRFNPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVTDWTRRFIFGRDSSRI 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi53g00021 576 SMART efh_1 378 406 IPR002048 GO:0005509
Vivi53g00021 576 SUPERFAMILY FAD/NAD(P)-binding domain 217 371 IPR036188 -
Vivi53g00021 576 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 420 575 - -
Vivi53g00021 576 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 42 403 - -
Vivi53g00021 576 SUPERFAMILY EF-hand 367 463 IPR011992 -
Vivi53g00021 576 Coils Coil 438 458 - -
Vivi53g00021 576 PANTHER NADH DEHYDROGENASE 46 576 IPR045024 GO:0003954|GO:0006116
Vivi53g00021 576 Pfam Pyridine nucleotide-disulphide oxidoreductase 51 377 IPR023753 GO:0016491
Vivi53g00021 576 SUPERFAMILY FAD/NAD(P)-binding domain 50 269 IPR036188 -
Vivi53g00021 576 ProSiteProfiles EF-hand calcium-binding domain profile. 374 409 IPR002048 GO:0005509
Vivi53g00021 576 Gene3D - 420 575 - -
Vivi53g00021 576 Gene3D - 43 403 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi53g00021 1 576 Chloroplast and Mitochondria Gene Families AT4G21490 72.727 0.0 866
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi53g00021 K03885 - gmx:100802661 1051.58