Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi538g00010 ATGCAAGAAACCACACCAATTCACTTCCAAACCACTCGAGTCTTACCCGAATACGATGTGTTTATTCACACTTCCGATGGTACTCGCATTCCTGCACACACAAGCATTCTGGCATCAGTCTCGCCGGTTCTCGAGAACATTCTAGATCAACCGCGTAAACACCGCAGCTCCGAACGAATAATCCAAATCCACGGCGTTCCTTCCACCGCCGCAACCGCTTTCGTCGGCTTCCTCTACTCATCCAGATGTACTGAAGATGAAATGGACAAATACGGAATCCATTTGCTAGCACTATCTCATGTCTACAACGTGCCGCAACTGAAACAGATTTGCATCAAAGGCCTATCTCAACGGTTAACAGTAGAGAACGTGGTTGATGTACTCCAACTCGCTAGGCTCTGCGACGCACCGGATCTCCGTCTCCGCTGTATGAAGCTTCTCACCAATCACTTCAACACCGTTCAAAAAACCGAAGGGTGGAAGTTTCTGATAAAACACGACCCCTGGCTTGAACTCGATATTCTTCGGTTTATGGATGAAAGCGAAACGAGGAGAGAGAAATTGAAGAAGCATAAGGAGGAGTTTGGATTGTATGCAGAACTGAGTGAGGCGATGGAGTGTTTGGAGCATATATGTACGGAGGGGTGTATTGATGTTGGGCCGTATAATGTGGAGGTTGACAGAGAGAAAAAACCGTGTAAGAGATTCTCGACGTGTCAGGGTCTTCAGCTTCTGATTCGTCATTTTGCTATGTGTAAGAGGAGGGTGAAGGGAGGGTGCTTGAGATGCAAGCGTATGTGGCAGCTGTTTAGATTGCATTCGTATGTTTGTCAACAGAATGATTCTTGCAATGTTCCTCTTTGCAGGCAATTTCAATTGAGAATGGAGCAAGAGAAAAGGAAAGATGATCCCAAGTGGAAACTACTAGCAAAAAAGGTGGTCTCAGCAAAAGTGATGTTTTCCTTGTCTCTACCAAAGAGGAAAAGGGATGAAGAAATGAGAGTGACCATGGACAGTCGTGGAATCAGACATTTTGGCTACAATGAATATTGTAACAATCGATGTGTTTCGTGTTGA 1077 0.4531 MQETTPIHFQTTRVLPEYDVFIHTSDGTRIPAHTSILASVSPVLENILDQPRKHRSSERIIQIHGVPSTAATAFVGFLYSSRCTEDEMDKYGIHLLALSHVYNVPQLKQICIKGLSQRLTVENVVDVLQLARLCDAPDLRLRCMKLLTNHFNTVQKTEGWKFLIKHDPWLELDILRFMDESETRREKLKKHKEEFGLYAELSEAMECLEHICTEGCIDVGPYNVEVDREKKPCKRFSTCQGLQLLIRHFAMCKRRVKGGCLRCKRMWQLFRLHSYVCQQNDSCNVPLCRQFQLRMEQEKRKDDPKWKLLAKKVVSAKVMFSLSLPKRKRDEEMRVTMDSRGIRHFGYNEYCNNRCVSC 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi538g00010 358 SMART TAZ_2 198 289 IPR000197 -
Vivi538g00010 358 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 16 331 IPR044513 -
Vivi538g00010 358 SUPERFAMILY POZ domain 18 117 IPR011333 -
Vivi538g00010 358 SMART BTB_4 18 119 IPR000210 GO:0005515
Vivi538g00010 358 FunFam BTB/POZ and TAZ domain-containing protein 2 191 317 - -
Vivi538g00010 358 Gene3D - 120 191 - -
Vivi538g00010 358 Pfam BTB/POZ domain 19 117 IPR000210 GO:0005515
Vivi538g00010 358 Gene3D Potassium Channel Kv1.1; Chain A 15 119 IPR011333 -
Vivi538g00010 358 FunFam BTB/POZ and TAZ domain-containing protein 2 120 190 - -
Vivi538g00010 358 ProSiteProfiles BTB domain profile. 18 87 IPR000210 GO:0005515
Vivi538g00010 358 Gene3D TAZ domain 192 317 IPR035898 -
Vivi538g00010 358 SUPERFAMILY TAZ domain 196 292 IPR035898 -
Vivi538g00010 358 Pfam TAZ zinc finger 202 288 IPR000197 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Vivi538g00010 BTB 1.2e-12 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi538g00010 - - cam:101496955 643.654