Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi538g00009 ATGGCCAGAAAATATGAAGGACATGCAATTGGAATTGACCTTGGTACAACCAACTCGCGTATTGCTGTGTGGCAGGAGCAAAACAACAGAGCGGAGATAATCTACAATGAAGCTTCTTTTGTTGCTTTCACTGATGATAGAAGGTGGTTGATTGGTAATTCTGCCAAAAATCAAGCAGCCTCTAATCCATCCAACACTGTATTTGATGTAAAGAAGTTTCTTGGAAGAAAATACAGTGATCCTATAATTCAGAACAATCTACTGTCGTGGCCGTTTAGGGTCATTTCTAGTAAAGATGACAAGCCCATGATTCGTTTTAGTTACAAAGATAAGGAAAAACACCTTTCGCCTGAAGAAATATTAGCTTTGATATTCAAAAAGATGATGGATACTGTGAAGGCGTTTTTGAAGTCACCGGTAAAAAATGCAGTGATTACAGTGCCTGCATATTTCAACGATTCTCAGCAAAAAGCCATCAATGATGCTGCTGTCAATGCTGGCCTCAATGTAAAGGGATTAATTAATGAACCAACTGCTGCTGCCATTTCATATGGTCTTCATAAGAGAGCAACTTGTGTTGAAAATAGAAATATTCTCGTAGTTGATCTTGGTGGCGGAACTTTTGATGTGTCTCTCATCACATTCAAGGATGGCAAGTTTGAAATAAAGGCGGCGAGAAACACTCAATTTGGAGGTGAAGACTTTAATGAAAGAATGATGAACCATTTTGTGAAGGAGTTCAAGAGAGAGCACAAAAGCGACATTAGTAGAAACTCAAGGGCGCTTAGGAGGTTGAGAACTGCGTGTGAGAGGGCGAAAAATGCACTTTCATTTTATAGTTCCACTTTTTTAGTAGAAGATATATATGATGGACTTTATTTCTTTTCATCAATAACGTCGGCTAAGTTTGAGCAACTCAACATAAACCTCTTTGATACTTTTATGAATATAATTAAGGTCTGTCTTTTTGATGCGAAGATAAACAATAGCAGTGTTGATGAAGTTGTTCTAGTGGGTGGCTCTTCAAGGATTCCCAAAGTTCGGCAGCTACTGCAGAACTTTTTCAAAAAAGGGAAGAATATCTTCGATATAATCGGTCCTGATGAGGTTGTTGCTTGTGGTGCAACTATACATGCTGCATTGTTGAGTGGAAGTCTTAAGAATGTTCCAAAGGAAGTGCATCAATATCTTACAAGGTTGTCTCTTGCAGAACTGGAACCAGAGCCAATACCAAGAAATATAGTGAATCATAAAAGAGTTAAGCTTACAATTGAGGATAACAGTTCTAAGATCATGATTGATTTTCAAGGTGGTGTTGGAATTACTCTTAATGTTCCTGGTTCGTTTGATGTCTCACTTCCTGATACTGCTCTAGCCCTTCCTATCAATTGTTGCTTTGCTACGGATTCTGATGGTATGTTAAATGTTTCCACTGAGGTACAAACTATTTCCAAAGATATCAAAATAACAAATGAGAATGTGAGGGTGGAGTTTCGAAGTATTGATCATATCATTAGACCACAGATGGCTACATTTGACAATGCGAGAGATGTGATCCAAGACATCTGTTGTAAGGAGAATGCCACAGATGCAGGGAAGGTGGCGGTCATGGTTTGGGTGTTGTGGAATAACTGGAATAATTGGATTTGGAATGAAGATAAAAAAGATGCTAACCAATTAGGCGCGCAAGGTTATCATATGTGGCAAGAGTGGTTCTTGGCCCAAGGGTCAATGGGTAACGAAACCAATAGAATTCACTACCAGACTACATGGCGACCACCTCAACCGGGCACGACTAATGGAGGATGGTGTGTTAGAGATGGCGGTGGAAGATTCATTGTGGCGGGTACATCGTGGAATAATGGTAGATTTTCTATTGTTGAAGTGGAGGCAATTGCTTTGAAGGAAGCAATCCAAGGAGCAATCAACTTAAATCTGCAGAACATCATTTTTGAAAGCGACTCCCAACTAGTGGTCCAAGCAACTCATGCTACTTCTCCGGGTAACTCTGAATACAATATGATTATAAATAGTATCCAAAATTTGCTAAATTCTCGAGACGACTTTGAGGTTAAGTTTGTTAAGCATCAAGCCAATTATTGGTCTCGACGCGCGGTTCTCTACTTGATTCCTCCGTGTATTGAACAATATTTATTTAATGAAATGAATTGA 2172 0.3918 MARKYEGHAIGIDLGTTNSRIAVWQEQNNRAEIIYNEASFVAFTDDRRWLIGNSAKNQAASNPSNTVFDVKKFLGRKYSDPIIQNNLLSWPFRVISSKDDKPMIRFSYKDKEKHLSPEEILALIFKKMMDTVKAFLKSPVKNAVITVPAYFNDSQQKAINDAAVNAGLNVKGLINEPTAAAISYGLHKRATCVENRNILVVDLGGGTFDVSLITFKDGKFEIKAARNTQFGGEDFNERMMNHFVKEFKREHKSDISRNSRALRRLRTACERAKNALSFYSSTFLVEDIYDGLYFFSSITSAKFEQLNINLFDTFMNIIKVCLFDAKINNSSVDEVVLVGGSSRIPKVRQLLQNFFKKGKNIFDIIGPDEVVACGATIHAALLSGSLKNVPKEVHQYLTRLSLAELEPEPIPRNIVNHKRVKLTIEDNSSKIMIDFQGGVGITLNVPGSFDVSLPDTALALPINCCFATDSDGMLNVSTEVQTISKDIKITNENVRVEFRSIDHIIRPQMATFDNARDVIQDICCKENATDAGKVAVMVWVLWNNWNNWIWNEDKKDANQLGAQGYHMWQEWFLAQGSMGNETNRIHYQTTWRPPQPGTTNGGWCVRDGGGRFIVAGTSWNNGRFSIVEVEAIALKEAIQGAINLNLQNIIFESDSQLVVQATHATSPGNSEYNMIINSIQNLLNSRDDFEVKFVKHQANYWSRRAVLYLIPPCIEQYLFNEMN 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi538g00009 723 ProSitePatterns Heat shock hsp70 proteins family signature 3. 335 349 IPR018181 -
Vivi538g00009 723 Pfam Hsp70 protein 9 506 IPR013126 GO:0005524|GO:0140662
Vivi538g00009 723 PRINTS 70kDa heat shock protein signature 459 475 - -
Vivi538g00009 723 PRINTS 70kDa heat shock protein signature 143 163 - -
Vivi538g00009 723 PRINTS 70kDa heat shock protein signature 8 21 - -
Vivi538g00009 723 PRINTS 70kDa heat shock protein signature 365 385 - -
Vivi538g00009 723 PRINTS 70kDa heat shock protein signature 55 63 - -
Vivi538g00009 723 PRINTS 70kDa heat shock protein signature 332 348 - -
Vivi538g00009 723 PRINTS 70kDa heat shock protein signature 206 216 - -
Vivi538g00009 723 FunFam Heat shock cognate 71 kDa protein 231 313 - -
Vivi538g00009 723 Gene3D - 592 705 IPR036397 GO:0003676
Vivi538g00009 723 Gene3D - 10 380 - -
Vivi538g00009 723 SUPERFAMILY Actin-like ATPase domain 8 188 IPR043129 -
Vivi538g00009 723 FunFam heat shock 70 kDa protein-like 68 123 - -
Vivi538g00009 723 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Vivi538g00009 723 SUPERFAMILY Ribonuclease H-like 595 699 IPR012337 -
Vivi538g00009 723 ProSitePatterns Heat shock hsp70 proteins family signature 2. 200 213 IPR018181 -
Vivi538g00009 723 Gene3D - 189 362 - -
Vivi538g00009 723 Gene3D Actin; Chain A, domain 4 232 313 - -
Vivi538g00009 723 PANTHER HEAT SHOCK PROTEIN 70KDA 9 501 IPR013126 GO:0005524|GO:0140662
Vivi538g00009 723 SUPERFAMILY Actin-like ATPase domain 195 382 IPR043129 -
Vivi538g00009 723 Gene3D - 68 123 - -
Vivi538g00009 723 CDD RNase_H_like 595 699 IPR044730 -
Vivi538g00009 723 Pfam Reverse transcriptase-like 589 699 IPR002156 GO:0003676|GO:0004523
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi538g00009 1 506 Calmodulin-binding Proteins AT3G12580 49.718 3.89e-158 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi538g00009 K03283 - gmx:102667578 484.567