Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi538g00001 ATGTCATCATCCATTTGTCACATGTTAATATCACTTCTTCTTTTTGTTTTTCTGCAACATACCCTTGCAATTAAACAGTCCTATATTGTGTATTTAGGATCACATTCTTTTGGTTCAAATCCTTCGTTACTTGATTCTGAATCTATCACAAACTCTCACTATGATTTACTTGGATCTTACCTTGGAAGTACTGAGAAGGCCAAAGAAGTAATATTTTACTCTTACAATAAATATATTAATGGTTTTGCTGCAATACTTGAAGAAGATGAAGCAGCAGAGATTGCAAAAAATCCAAATGTTGTGTCAATGTTTTTAAATAAAAGATATGAATTACACACGACCCGATCGTGGAATTTCCTTGGGTTAGAGAGGGACGGTGGATTTCCTAACGATTCAGCCTGGAAAAAATCATTGGGTGAAGACATCATTATTGGAAATTTGGACTCTGGTGTTTGGCCAGAATCCAAAAGTTTTAGTGATGAAGGATATGGACCAATTCCAAAAAAGTGGAAAGGAATTTGTCAAGTTGCGGAAGGAAACCCAGATAAATTTTATTGCAACAGGAAACTCATTGGAGCAAAATATTTTTATAAAGGATATCAGGCAACTCCCGGAGCGAAAAATGTAACCTTTAATAGTGCACGTGACCTCGATGGTCATGGCACACATACTTTATCCACTGCCGGAGGTAATTTTGTTGCGGGAGCTAATGTATTGGGCTTTGGAAATGGAACAGCAAGTGGTGGATCACCAAAAGCTAGAGTTGCAGCCTATAAGGTCTGTTGGGAAGGATGTAGTGAAGCAGATATTTTGGCTGGTTTTGAAGCTGCCATAGCTGATGGCGTTGATGTTCTTTCTGTGTCCTTGGGTGGAAATGATCCGCTAGAGTTTTTTTCAAGTGGTCTTTCCATAGGTTCCTTCCATGCAATTGCCAACAACATCACTGTTGTGGCTTCTGCAGGAAATTCAGGACCTGATACCGCGCCTGTAGTAAATGTCGATCCATGGATTCTTACAGTTGCTGCTAGCACAATTGATAGAGACTTTGCAAGTTATGTCATTCTTGGTAACAAAAAAATATACAAGGGAGCTAGTCTTTCAGAGTTGAACTTACCACCTAACAAATTATATCCATTGATAAGTGGTTCAGATGCCATGTTTGATGAGAAGAAATATTTGCTTGATGATGCCATGCGTTGCGTAGAAGGATCTCTTGATCCCAAAAAAGTTAAAGGAAAAATACTGGTATGTCTTAGAGGGGAGACTGGTAGAGTTGACAAGGGTGTGCAAGCTTTACGTGTAGGTGCTATTGGAATGATAATAGATAACTTTGATCAGGGGTACGAAGTTATAGCAGATCCTCATGTGCTTCCCGCTACGCATGTTTCCTTTAAATATGGGAATTTCATTAATAATTACATCAAAGAAACAAAGTCTCCTGTGGCTTTCATTACTAAAGTTAAAACACAATTGGGTATAAAGAACACTCCAATGATGGCTTCATTTTCCCCAAGAGGCCCAAATATCATTGATCCCTCAATCCTTAAGCCTGATATCACTGCACCAGGCGTCAATATAATTGCAGCTTATTCTCTAGCTACATCTCCGACAAATCAACCGTCTGATAAGCGTAGAATTCCCTTTGCTCCTCTGTCAGGCACTTCGGTATCATGTCCTCATGTTGCTGGACTAGTTGGACTAATTAAATCTGTTCATCCTGATTGGAGTCCAGCTGCTATCAAGTCAGCAATTATGACCACAGCAACAACAAAAACTAACAACGGAGTGGATATATTGGATTCATCACTAGAGAAGGCAACTCCTTTCGATTATGGTGCAGGGCACATTCAACCTAATCTTGCGGTGGATCCTGGCCTTGTTTATGACCTTAATGTTACTGATTATTTGAACTACTTATGTGGTCGTGGATACACGAGTGATAAACTTAAAGTGTTCTACGACAAACCTTATACTTGTCCAAAATCTTTTAGTTTGGGAGATTTCAATTATCCATCAATCACAATTAAATCTGGACAGTCTTTGAGTGTTACTCGTACGCTTACCAATGTTGGATCCCCAAGTGAGTATACAGTGGAGGTCCAAGAACCCCCACAATTTCTAGCCACAGTTGAACCTAAGATATTAAGATTTACACATAAGGGTGAAAAAAGAGAGTTCAAGGTAACATTCACTAAGAAGTTAAATGATGTATTTTTCACTTATCATGCCTTTGGGAAGTTGATTTGGACCGATGGAAAGCATCGTGTTGGGTCTCCTATTACAATATCGTTCCAAGATTAG 2301 0.3903 MSSSICHMLISLLLFVFLQHTLAIKQSYIVYLGSHSFGSNPSLLDSESITNSHYDLLGSYLGSTEKAKEVIFYSYNKYINGFAAILEEDEAAEIAKNPNVVSMFLNKRYELHTTRSWNFLGLERDGGFPNDSAWKKSLGEDIIIGNLDSGVWPESKSFSDEGYGPIPKKWKGICQVAEGNPDKFYCNRKLIGAKYFYKGYQATPGAKNVTFNSARDLDGHGTHTLSTAGGNFVAGANVLGFGNGTASGGSPKARVAAYKVCWEGCSEADILAGFEAAIADGVDVLSVSLGGNDPLEFFSSGLSIGSFHAIANNITVVASAGNSGPDTAPVVNVDPWILTVAASTIDRDFASYVILGNKKIYKGASLSELNLPPNKLYPLISGSDAMFDEKKYLLDDAMRCVEGSLDPKKVKGKILVCLRGETGRVDKGVQALRVGAIGMIIDNFDQGYEVIADPHVLPATHVSFKYGNFINNYIKETKSPVAFITKVKTQLGIKNTPMMASFSPRGPNIIDPSILKPDITAPGVNIIAAYSLATSPTNQPSDKRRIPFAPLSGTSVSCPHVAGLVGLIKSVHPDWSPAAIKSAIMTTATTKTNNGVDILDSSLEKATPFDYGAGHIQPNLAVDPGLVYDLNVTDYLNYLCGRGYTSDKLKVFYDKPYTCPKSFSLGDFNYPSITIKSGQSLSVTRTLTNVGSPSEYTVEVQEPPQFLATVEPKILRFTHKGEKREFKVTFTKKLNDVFFTYHAFGKLIWTDGKHRVGSPITISFQD 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi538g00001 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 112 IPR037045 -
Vivi538g00001 766 CDD PA_subtilisin_like 352 484 - -
Vivi538g00001 766 Gene3D - 346 491 - -
Vivi538g00001 766 ProSiteProfiles Serine proteases, subtilase domain profile. 116 622 - -
Vivi538g00001 766 Pfam Fibronectin type-III domain 667 762 IPR041469 -
Vivi538g00001 766 FunFam Subtilisin-like protease SBT1.5 141 357 - -
Vivi538g00001 766 PRINTS Subtilisin serine protease family (S8) signature 552 568 IPR015500 -
Vivi538g00001 766 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Vivi538g00001 766 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Vivi538g00001 766 Pfam Subtilase family 139 597 IPR000209 GO:0006508|GO:0008236
Vivi538g00001 766 Pfam Peptidase inhibitor I9 27 112 IPR010259 -
Vivi538g00001 766 SUPERFAMILY Subtilisin-like 111 626 IPR036852 GO:0004252|GO:0006508
Vivi538g00001 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 553 563 IPR023828 -
Vivi538g00001 766 Gene3D - 639 764 - -
Vivi538g00001 766 Pfam PA domain 406 468 IPR003137 -
Vivi538g00001 766 Gene3D Peptidase S8/S53 domain 141 635 IPR036852 GO:0004252|GO:0006508
Vivi538g00001 766 CDD Peptidases_S8_3 109 589 IPR034197 -
Vivi538g00001 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 761 IPR045051 -
Vivi538g00001 766 SUPERFAMILY PA domain 407 479 IPR046450 -
Vivi538g00001 766 FunFam Subtilisin-like protease SBT5.3 17 112 - -
Vivi538g00001 766 FunFam subtilisin-like protease SBT1.5 346 491 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi538g00001 19 764 Subtilisin-like Serine Gene Family AT2G04160 54.545 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi538g00001 - - vvo:131630044 1175.61