Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi537g00003 ATGGATTTTGCTAATTCTGCTGGTGAAACTGATGAGTATAAAGATATAATTGAAAATCTTGTAATAGTCATTGGAACACCAAACTTGGTTGAGTTTTTTCCCGCTTTAAGGATGTTTGATCCACAAGGTGTTGGTTTTGTAATATTGATTTTAGGGAGTGAAAGTTCGGTACCTATAAAACATAACTCCAAAAAAAAACTTAGTAAAGGAGCTATCATTGCAATTTCTGTTGGTGGAGTTGTTCTGTTGTTTTTTGTAGTACTTGTCATTGTTCTTTGTTGTTTAAATAAAAAAGATAATGGAAGCTCGAGAGTTGTTAAAGCGAAGGGACCTAGTGGTGGTGGAAGGACAGAGATAGTGAAAGAAGAGTTTGGAAGTGGCGTGCAAGAATCTGAGAAAAACAAATTGGTTTTCTTTGAGGGTTGTTCTTATAATTTCGATCTCGAGGTTTTGTTGAGAGCTTCGGCCAAGGTTCTTGGAAAGGGAAGTTACGGAACCTCATATAAGGCTATATTGGAGGAAGCAACAACAGTTGTAGTGAAACGGTTGAAAGAAGTTGTAGTAGGAAAGAGGGAATTTGAACAGCAGACGGAGATTGTTGGAAGCATTGGAAATAACCTAAAGGTCGTTCCACTCCACGCTTGTTATTATTCGAAGGATGAGAGGCTTTTGGTTTGTGACTATTTCCCAAATGGAAATCTATCTATACTCTTGCATGGTATGCATTTCTGCGGACGAGCTAGCTTAGATTTGAACATGCGAGTAAAAATCACTCTCGGAATTTCTCGGGGAATTGCACATTTACATTCAGTTGGCGGTCCAAAATTCACACACGGAAATGTGAAATCCTCCAATGTCCTCATAAGCCAAGATAACGATGGCTGCATTTCAGATTTCGGCCTGACACCAATCATGAATGTTCCTGCGACCCCTTCCAGAACTGCAGGGTACCGTGCTCCCGAGGTAATCGAAACTTGGAAACACACTCATAAATCAGACGTGTACAGTTTCGGTGTCCTCCTTTTGGAAATGCTTACTGGTAAAGCGCCACAACAGTCTCTAGTATGCGATGACATGGTTGATCTGCCTAGGTGGGTTCAGTCTGTCGTTAGGGAGGAATGGACCGCCGAGGTTTTTGATGTGGAACTAATGAGGTACCAAAGTGAGATGAATGGACATGCTGATGGTACAAACTTTATGCCGCATTTACTCGGAGAATTTCAATATATTGATATTGATGATGGCACTTATATGTTAATACATAAGTTGTTAGATATATTGATATTGATGATGGCACTTATACGTTTTGCACTGCAGATGAAGAAAGTGAAAAACAGAGCTAGTAAAATAAAAAGAACACAGCTCTGA 1368 0.3969 MDFANSAGETDEYKDIIENLVIVIGTPNLVEFFPALRMFDPQGVGFVILILGSESSVPIKHNSKKKLSKGAIIAISVGGVVLLFFVVLVIVLCCLNKKDNGSSRVVKAKGPSGGGRTEIVKEEFGSGVQESEKNKLVFFEGCSYNFDLEVLLRASAKVLGKGSYGTSYKAILEEATTVVVKRLKEVVVGKREFEQQTEIVGSIGNNLKVVPLHACYYSKDERLLVCDYFPNGNLSILLHGMHFCGRASLDLNMRVKITLGISRGIAHLHSVGGPKFTHGNVKSSNVLISQDNDGCISDFGLTPIMNVPATPSRTAGYRAPEVIETWKHTHKSDVYSFGVLLLEMLTGKAPQQSLVCDDMVDLPRWVQSVVREEWTAEVFDVELMRYQSEMNGHADGTNFMPHLLGEFQYIDIDDGTYMLIHKLLDILILMMALIRFALQMKKVKNRASKIKRTQL 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi537g00003 455 PANTHER OS05G0588300 PROTEIN 60 388 - -
Vivi537g00003 455 Gene3D Transferase(Phosphotransferase) domain 1 229 425 - -
Vivi537g00003 455 Gene3D Phosphorylase Kinase; domain 1 120 228 - -
Vivi537g00003 455 Pfam Protein kinase domain 156 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi537g00003 455 SUPERFAMILY Protein kinase-like (PK-like) 157 374 IPR011009 -
Vivi537g00003 455 ProSiteProfiles Protein kinase domain profile. 153 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi537g00003 455 FunFam pollen receptor-like kinase 1 121 228 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi537g00003 58 388 Receptor kinase-like Gene Family AT5G58300 67.674 3.94e-154 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi537g00003 Pkinase 6.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi537g00003 - - vvo:131632919 867.455