Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi535g00010 ATGAGGTACTTTTGCTTTGATCTTTTGATTCTTACATGGCTTTTATTGTTCATCTCAAATAGTGATGAGTTAGAACAAGATCAAAGCCAAGCTTTGTTACAATTAAGAATGTTTTTGGAGTATCCTTCTTCATTACAAATTATGGAAAATTACAATGTTGATTTTTGTTATCTTCCTTTATCTTCAAATTTGAGCATTAAATGTGAAGATAATTCAATAATTGAGCTCAAAATTTTTGGTGATAAATCATTGAAACCCTCCTCAAGTTTCAATGGATTTGCAATTCCAAATCAAACACTATCCATGAATTTCTCAATTGATTCATTTTTCACCACATTGACAAAGTTGAAAACCCTAAAGGTTCTTACTTTGGTTTCATTAGGGATTTGGGGGAAACTTCCTAATAAGATTGATTCTCTTAGTTTGCTTCAAGTTTTGGATTTGAGTTCAAATTTCCTATTTGGTTCCATTCCACCAAAAGTCTCAACAATGGTGAATCTTCAATCACTAACACTTGATGAAAATTATTTCAACACCACTTTGCCTAATTGGTTTGATTCTTTGCTTAACCTAACTTTCTTGAGTTTGAAGAAAAATCACTTCAAGGGTTCATTTCCATTTTCGCTATGCAAAATCAAGAAACTCGAAGTTATTTCTTTGTCACAAAACGAACTATCGGGGGAATTGCCTAGTTTCGATTCTCTTAATGGTTTGCATGTTTTGGATTTGAGAGAAAACCGTTTCGAATTTGACCTACCGCGTCTGCCGAAATCCGTGGTCACGGTTTTGTTTAGCAATAACTCATTTTCGGGAGAGATTCCTAAGAAATTTGGCGAATTGAATCATCTTCAACATTTAGATCTTTCGTCAAATCGTCTTGAGGGCACGCCGCCTTCGACATTGTTCTCTCTGTCGAATTTAAGTTACTTGAGTCTAGCAAACAATGTGCTAAGTGGTGAGTTTTCTGATAAACTTGATTGTGGTGGAAAACTCGGTTATGTCGATATTTCTAGCAACAAGTTAAGTGGTTTACTTCCTTCGTGTTTGGCGAATAGTTCAGATGGTAGAGTTGTTAGATATGGTAGAAACTGTTTATCTGTTGAGGCTCAGAATCAGCAGAGAGGTTCTTATTGTAAGGATTTCGGTTCGAGATGGGAGAAATTCAAGATATTGAAAGTGGTTGCAATAGTGGCTATTGTTGTTGGATTTGTTCTTGTGGTTTTGGTTTTTGGAGTTTTGGTGTGTAAAAAATGTCATTTGATGAAGAAAAGTAGAAAGGAAGTGCTGGTAAAGACTGTTCAAGATAAATCCGCAACTGGCGTTTCATCGGAAGTTCTTGCAAATGCAAGATTTATTTCTCAAGCAGTGAAGCTAGGGACACAAACTAGTCCAATCTGCAGACAATTTTCTATCCAAGAGTTGAAGGAAGCTACCAAAAACTTTAGTTTGTTAACTTGTATTGGTGATGGCTCCATAGGAAAGCTGCATAAAGGTAAACTAGAGAATGGAGCTTATGTGGTGATAAGATCATTTGTTCTGTCAAAGAAATGTTCAATTCAAAATCTTAAAGCTAAGTTGGATTTACTCTCAAAGCTTGAACATCCAAATTTGGTTAGTCTTTTGGGTCATTGTATTGATGGTGGCGAACAAGATGATTCGAGCACACAAAAACTTCATCTTGTATATGAATATGTGCCAAACGGAGATTATCATACTCGTCTATCAGAATATTCTGCAGAAAAAGCACTTAAGTGGCCTGATAGACTAGCGATTTTGATTGGAGTTGCAAAGGCAGTTCATTTCTTACATACCGGTGTTATACCGGGATGTTTTAGCAACGAGTTAAAAACAAAGAATGTGTTACTTGATGAACACTGCATTCCTAAACTAAGTGACTATGGTATGTCCATTATCAGTGAAGATATTGAAAAGTTTGAGACAAAGAGTGAGAAGAAGTCAAAATCATGTCAAAGGACAAAGGATAACGATGTTTACAATTTCGGGTTCATATTGTTGGAATCACTTGTTGGACCCATTACATGCGACAAAGGTGAAACATATTTCCTAAATGAAAAGGCATCTTTTGGAAGTGAAGATGGAAGAAGAAAGATTGTGGATCCAATAGTGTTAACAACATGTTGTCAAGAATCACTATCAATTGCAATATCTATAACAACCAAATGTATATCTCAAGAATCTTCATCTCGTCCTTCTTTTGAGGATGTTCTATGGAATTTACAGTATGCAGCTCAAGTTCAAGCCACAGCAGATGCAGATCAAAAATCAGATTAA 2292 0.3556 MRYFCFDLLILTWLLLFISNSDELEQDQSQALLQLRMFLEYPSSLQIMENYNVDFCYLPLSSNLSIKCEDNSIIELKIFGDKSLKPSSSFNGFAIPNQTLSMNFSIDSFFTTLTKLKTLKVLTLVSLGIWGKLPNKIDSLSLLQVLDLSSNFLFGSIPPKVSTMVNLQSLTLDENYFNTTLPNWFDSLLNLTFLSLKKNHFKGSFPFSLCKIKKLEVISLSQNELSGELPSFDSLNGLHVLDLRENRFEFDLPRLPKSVVTVLFSNNSFSGEIPKKFGELNHLQHLDLSSNRLEGTPPSTLFSLSNLSYLSLANNVLSGEFSDKLDCGGKLGYVDISSNKLSGLLPSCLANSSDGRVVRYGRNCLSVEAQNQQRGSYCKDFGSRWEKFKILKVVAIVAIVVGFVLVVLVFGVLVCKKCHLMKKSRKEVLVKTVQDKSATGVSSEVLANARFISQAVKLGTQTSPICRQFSIQELKEATKNFSLLTCIGDGSIGKLHKGKLENGAYVVIRSFVLSKKCSIQNLKAKLDLLSKLEHPNLVSLLGHCIDGGEQDDSSTQKLHLVYEYVPNGDYHTRLSEYSAEKALKWPDRLAILIGVAKAVHFLHTGVIPGCFSNELKTKNVLLDEHCIPKLSDYGMSIISEDIEKFETKSEKKSKSCQRTKDNDVYNFGFILLESLVGPITCDKGETYFLNEKASFGSEDGRRKIVDPIVLTTCCQESLSIAISITTKCISQESSSRPSFEDVLWNLQYAAQVQATADADQKSD 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi535g00010 763 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 444 564 - -
Vivi535g00010 763 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 259 383 - -
Vivi535g00010 763 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 565 763 - -
Vivi535g00010 763 ProSiteProfiles Protein kinase domain profile. 481 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi535g00010 763 PANTHER UNNAMED PRODUCT 110 678 - -
Vivi535g00010 763 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 160 252 - -
Vivi535g00010 763 Gene3D Ribonuclease Inhibitor 25 258 IPR032675 -
Vivi535g00010 763 Gene3D Phosphorylase Kinase; domain 1 423 564 - -
Vivi535g00010 763 Pfam Leucine rich repeat 143 201 IPR001611 GO:0005515
Vivi535g00010 763 Pfam Leucine rich repeat 282 341 IPR001611 GO:0005515
Vivi535g00010 763 Pfam Protein tyrosine and serine/threonine kinase 484 744 IPR001245 GO:0004672|GO:0006468
Vivi535g00010 763 ProSiteProfiles Leucine-rich repeat profile. 282 303 IPR001611 GO:0005515
Vivi535g00010 763 Gene3D Ribonuclease Inhibitor 259 381 IPR032675 -
Vivi535g00010 763 SUPERFAMILY L domain-like 94 363 - -
Vivi535g00010 763 SUPERFAMILY Protein kinase-like (PK-like) 462 746 IPR011009 -
Vivi535g00010 763 Gene3D Transferase(Phosphotransferase) domain 1 565 763 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi535g00010 8 691 Miscellaneous Gene Families AT5G14210 52.814 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Vivi535g00010 PK_Tyr_Ser-Thr 1.7e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi535g00010 - - gmx:100799183 1048.88