LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi532g00018	ATGCAAATTCCGTTTAAGTTTAACCTTTCTCAATCATCATCATCATCATCACTGTTCTTCGTTCTTCTCTTGTTCTGTTGTCATGGTGCAAATGGGTTTGGTACCATGGGACCAATCTCAGCTTCATTTGGCGAATACGAAGTGTTCTGCTCGATTGATGCTAGTGGAAAACAAGACGTTATCTGTTGGGGGAAAAACACCACTTCACCGCAGCCTATTTCTTCTTCGTCCTATGTTACCAACATTCCTGCCATGTCTGCGCTTTCTGGCGGTGAAGGCTTTCTCTGCGGCATTCTAGCTAACACTTCGCAGGCGTTTTGTTGGGCTGCGACGTCGAAGCAAAACGCAGATCCCGTTTTGGTTCCTTCGTTGTATAGGAATACTGCGTATTCTCGTATAGCGGCTGGGAAGAATCATGTTTGTGCTGTTAGAGGTTCTTATTACTCGGATCGTGATTCCGGGACTGTGGATTGCTGGCAAATCTTGAAGAGAGGTAAAAACGGTACGTTGACGGCGGTGCTTAATGGTTTGTTCTTTGATCAATCGGTTGTTAATCTGGAAATGAATAGTGTTGTTTCCGGTGAAGGGTTTACCTGTGGTGGGGTTAGAGATGGAGGGTTGGTTTGTTGGGGGCCTAATTCAACAAGCTTGAAGGTTTCCAATGTTACTGATAGTTTTTCTGCTTTAGCTGCGGGGAGGACTGCCTTGTGCGGTGTTTCGAATATCACCGGTGATGTGAGATGCTGGGGCGATATCGAACCTCCGACGACAACCGAGGTTTGTTTCGTTTCGCTATCTGGCGGGGCGCATCATTTCTGCGGTGTTCGAGAGGATAATCATGTGGTTCAATGTTGGGGTAACTTGAGTTCATCTTTGGTTCCTAAAGGTTATGGCTTTATGGCAATTGCTTCTTCGGATTACACCACTTGTGGTATAAGGGAAGATGATCTTTTACTAGATTGTTGGTTGGTCAACGCTTCAAAGGCTGATTTTGATCCTCCTTTAGAGCTTTCAAGTCCTGGTCTTTGCAGGTCAAGTTCTTGTGGAGTCAATGAGTTTGATTTCAATGTTAGTGTTCTTAGTCAGCCTGATTTGACGAGTTTGTGTGTGAGACAGGGTTTGAGGATTTGTTCGCCTTGTGGGTATAATTGTTCACAAGGGTACTTTTTGTCAAGTCCTTGTACTCGAAATTCTGATAGAGTTTGCACAGCTTGTTCTCTATGTCAGAACAGTTCTTGTTTGAGTGTTTGCAGACTTCATTCTTCGAACGGGTTTTTTCATTGGCATCATATCCGTAGATGGGTTCTCATAGTTGGATCTTCCGCTTTGTGTTTGTTGCTGATTTTGGTTTGTGTGTGTTTTTTTCGATGTTGTGCTTGTTCAAGGGGACAACGACATGGGAAACACTCCAAGTCTTGTATCGGTAAACATGAACAAGAAGACAATGATGACGTGATTGGTAATGGTAATGGTAATGGTCATCTTCACTCGTTTCCTTCGGCTAGTTCTTGTCCTGGTTTGCCTCAGGTTTTCAGGCTTTCGGAGTTGAAAGACGCTACCAATGGTTTCAAGGAGTTTAATGAGCTTGGAAGAGGAAGTCATGGATTTGTTTACAAAGCAAATTTGGCTGACGGGAGAGTGGTTGCGGTGAAAAGAGCAAACGCTGCTACGATAATACACACCAACAATCGCGACTTTGAAATGGAGTTGGAACTTTTGTGCAAAATTCGTCACTGCAATGTGGTAAACTTGTTGGGTTATTGTGCTGAGATGGGAGAGAGGCTGCTTGTTTATGAGTATATGTCTCATGGAACACTTGCTGATCACATTCATGGTGGTCTTTCTCCTCTTAATTGGAGCTTAAGGCTCAAGATAGCTATGCAATCAGCAAAAGGGGTTGAGTATCTTCACAAGGAACTATCACCTCCAATTGTTCATAAGGATCTCAAGAGTTCCAGCATTCTCTTGGATTCAGAATGGGGGGCTAGAGTTTCCGATTTCGGACTTGTTATTTCAAGCGATAAGGATCTTAACGCGGACTTTGAAAGTGATGTTTACAGCTTCGGGATAGTGCTGTTGGAGATTCTAAGTGGAAGGAAGGCTCATGATATAGATTTTGATCCACCTAATATTGTTGAGTGGGCAGTGCCTTTGATCAAACAAGCTAAAGCAGCTGCAATAATTGATCGCAGCATCACTCTTCCGAGAAATGTCGAGCCTTTGCTTAAGCTAGGCGATATAGCAGAGCTTGCTCTGAGAGAGAATCCGAGTGAGCGTCCATCTATGTCGGATATAGCATCTTGGTTGGAGCAGATTGTGAGGGATGGATTGATCTTATAA	2340	0.4376	MQIPFKFNLSQSSSSSSLFFVLLLFCCHGANGFGTMGPISASFGEYEVFCSIDASGKQDVICWGKNTTSPQPISSSSYVTNIPAMSALSGGEGFLCGILANTSQAFCWAATSKQNADPVLVPSLYRNTAYSRIAAGKNHVCAVRGSYYSDRDSGTVDCWQILKRGKNGTLTAVLNGLFFDQSVVNLEMNSVVSGEGFTCGGVRDGGLVCWGPNSTSLKVSNVTDSFSALAAGRTALCGVSNITGDVRCWGDIEPPTTTEVCFVSLSGGAHHFCGVREDNHVVQCWGNLSSSLVPKGYGFMAIASSDYTTCGIREDDLLLDCWLVNASKADFDPPLELSSPGLCRSSSCGVNEFDFNVSVLSQPDLTSLCVRQGLRICSPCGYNCSQGYFLSSPCTRNSDRVCTACSLCQNSSCLSVCRLHSSNGFFHWHHIRRWVLIVGSSALCLLLILVCVCFFRCCACSRGQRHGKHSKSCIGKHEQEDNDDVIGNGNGNGHLHSFPSASSCPGLPQVFRLSELKDATNGFKEFNELGRGSHGFVYKANLADGRVVAVKRANAATIIHTNNRDFEMELELLCKIRHCNVVNLLGYCAEMGERLLVYEYMSHGTLADHIHGGLSPLNWSLRLKIAMQSAKGVEYLHKELSPPIVHKDLKSSSILLDSEWGARVSDFGLVISSDKDLNADFESDVYSFGIVLLEILSGRKAHDIDFDPPNIVEWAVPLIKQAKAAAIIDRSITLPRNVEPLLKLGDIAELALRENPSERPSMSDIASWLEQIVRDGLIL	779

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi532g00018	779	ProSiteProfiles	TNFR/NGFR family cysteine-rich region domain profile.	347	402	IPR001368	GO:0005515
	Vivi532g00018	779	Gene3D	-	74	334	IPR009091	-
	Vivi532g00018	779	PANTHER	SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4	18	773	-	-
	Vivi532g00018	779	Gene3D	Phosphorylase Kinase; domain 1	498	600	-	-
	Vivi532g00018	779	FunFam	serine/threonine-protein kinase-like protein CCR1	493	600	-	-
	Vivi532g00018	779	FunFam	Serine/threonine-protein kinase-like protein CCR1	678	776	-	-
	Vivi532g00018	779	ProSitePatterns	Protein kinases ATP-binding region signature.	529	551	IPR017441	GO:0005524
	Vivi532g00018	779	SUPERFAMILY	Protein kinase-like (PK-like)	498	770	IPR011009	-
	Vivi532g00018	779	Pfam	Protein tyrosine and serine/threonine kinase	527	674	IPR001245	GO:0004672\|GO:0006468
	Vivi532g00018	779	Pfam	Protein tyrosine and serine/threonine kinase	680	767	IPR001245	GO:0004672\|GO:0006468
	Vivi532g00018	779	SUPERFAMILY	RCC1/BLIP-II	47	290	IPR009091	-
	Vivi532g00018	779	ProSiteProfiles	Protein kinase domain profile.	523	769	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi532g00018	779	Gene3D	Transferase(Phosphotransferase) domain 1	601	674	-	-
	Vivi532g00018	779	Gene3D	Transferase(Phosphotransferase) domain 1	675	776	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi532g00018	18	771	Receptor kinase-like Gene Family	AT3G59420	32.289	4.13e-108	349

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CR4L	Vivi532g00018		PK_Tyr_Ser-Thr	6e-28	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi532g00018	-		-	gmx:100802259	1132.47