Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi531g00012 ATGTCAGAACAAGATTCTGATTCATGGAGTTTCTTGTTTCTCTGTCTCTTGATCCTTTTCTCAGGTAAACTAGTTCTTGGTGATTCATTGGAAACAGACAAAGAAGTACTATTGAAGCTAAAATCCTATTTGCAGAATCAAACAGTTTCAAATAAAGGAGGTTACATAAGATGGAACATGAACACTTCAAATCCTTGTGATTGGTCAGGAATCTCATGCAGCATGATCACAGGAGAAACAAGGGTTGTGAGTGTTGATATTTCAGCGAGCGAGGTGGCAGGTAAGATGTTTGATCATTTTTCTGAGCTAAGCGAACTTGCGCATCTTGATGTCTCGTGGAACACTCTCCGCGGAGAGATTCCCGAGGATTTAATGAAGTGTAGTAATCTTGTGTTTCTCAATTTGTCTCACAATATTCTCGAAGGGGAGATGAATTTGACTGGTTTGAGAAAGTTGAAAACGTTGGATTTGTCCACGAATAGACTTCATGGGGATATTGCGTTGAGTTTTCGTAATCATTGTGATGATTTGGTTAGTTTGAATGTTTCGGATAATCACTTTTTTGGTAGGATTGATGAGTGTTTCGATGAATGTTCGAGGTTGAAGTATTTAGATTTGAGTACAAATAATATAAGTGGTGCTTTATGGAATGGGATTTCGAGGTTGACAGAGTTTTCTATTTCGGAGAATTTTCTAACTGGGAATGTTTCTTCTCAAGCTTTTCCGACGAATTGTAGTCTTGAAAAATTGGATCTTTCTGTCAACAGATTTTTTGGTAAACCGCCTAAAGAAGTTGCAAACTGTAAGAATTTAGAGATTCTCAATCTTTCTAGTAACAAATTTAGCGGTGAAATACCTCGGGAAATTGGTTCGATTTCTGGTCTTAAATCACTGTTCTTGCAGAATAACACCTTTTCAAGAGATATTCCGGATACACTTTTGAATTTGAACAATTTGTTCATTTTGGATGTGAGCAGGAACAACTTTGGTGGTGTGGTACAAGAGATTTTCGGTAAATTCAAGCAATTGAAGTTTCTTTTGTTGCACGCAAATTCTTATGTTAAAGGGTTGAATGAATCAGGAATTTTCACATTGACTAATCTTACGAGATTAAACTTATGTTTCAACAACTTTTCAGGTCCGTTACCAGCTGAAATCTCTCAAATGTCTGGTCTCATATTCTTAACATTAAGCAACAACAACTTTAATGGAACTATTCCGTCTGAATTAGCGAAGTTGAGTAAATTGCAAGCACTTGAACTTGCTTTCAATAGTTTCAGTGGACCAATTCCAGCAAGCTTAGGAAAGTTGAATTCTCTCTTGTGGTTAATGCTTGCAAATAATTCGTTAACCGGTCAAATACCGCATGAGTTAGGTAACTGTTCAAGTTTGTTATGGTTGAACCTTGCAAACAACAAACTCACCGGAAAGTTTCCTTCTGAGTTGACCGGAATTGGAAGAAATGCTATGGAGACGTTTGAATTAAACCAAAAAAATTTGGTCAGTGTTGTTGCTGGAAATAGCGAATGTTTATCGATGAAAAGTTGGATACCTGCTAATTACCCTCCATTCAGTTTTGTGTATAGTATCTTAACACGGAAAAATTGTAGAGCCCTTTGGGATAGATTACTCAAAGGATATGGAATTTTTCCTATGTGTTCATCAGAACCTTCTTCTAGATCATCTCATAAATTTGGTTATGTTCAGTTAAGTGGTAACATGATCAGTGGAGAAATTCCTTCAGAAATCGGGAACATGGTGAATTTCAGTATGTTGCATTTAGGTGACAATAGATTCAATGGCGAATTCCCAAAAGAGATTGGTGGTTTACCACTTATTGTCTTGAACATGACCAGGAACAAATTTTCAGGTGAAATTCCAACTGAAATCGGTGACATGAAGTGCATGCAGAATCTTGATTTGTCTTGGAACAATTTCTCAGGTGCATTTCCGACAAGTTTGGTCAAATTGGATGAGCTTAGCAGGTTCAACATCTCATATAATCCTCTGTTATCTGGTACGGTACCTCTAACCGGACATTTGCTTACTTTTGATAAAGATTCCTATTTAGGCGATGCCCTCTTAGATCTTCCGAAATTCTTTGATAATACCCCAGATGGAAAAAACAAAACATTACACATACAGATGAAAAAAGCAACAAAATGGTATTTTTTTGTTGCTATAACACTAGCTATTTTGGTTTCTGGACTTCTTTCTCTAACTGTCTACTTCTTGGTGAAAAGTCCGTCCGAGGAACAAAGAAAGTTTCTGCAGGATAAAAACCGAAAGCATAATGATTCAAGTAGCTATGGGTCGTCACAATGGTTATCTGATACTGTCAAGATATTCCATTTGAACAATGTAGTTTTCACGCATGCCGACATTTTGGAAGCAACTAGCAACTTCAAAGAAGAGAGAATCATAGGAAAAGGCGGTTTTGGAACGGTTTACAAAGGAGTTTTTCCTGACGGAAGAGTAGTGGCAGTGAAGAAGCTACAAAGGGAAGGAACCGAAGGCGAGAAAGAATTCAAAGCTGAAATGAAAGTCCTTAGTGGTCAAGAATTTGGGTGGCCTCATCCAAATCTTGTCACACTTTACGGTTGGTGCTTATACGGTTCAGAAAAGTTACTAGTTTACGAGTACATAGGAGGTGGAAGTTTGGAAGAGCTAGTAACAGATACGAAAAACATGACTTATAAAAGGCGGTTAGAAGCCGCGATTGATGTGGCTAAAGCGTTAGTTTATTTACACCATGAATGTTACCCACCGATCGTGCACAGAGACGTGAAGGCTAGTAATGTGTTGCTTGACAAAGAAGGCAAAGCAAAAGTAACAGATTTCGGGCTTGCTAGAGTAGTTGATGTTGGTGATAGCCACGTGAGTACAGTTGTTGCTGGAACTGTCGGATATGTTGCACCTGAATATGGACTAACATGGCAAGCTACAACAAAAGGCGACGTGTATAGTTTTGGCGTGTTGGTCATGGAGTTAGCGACCGGGAGAAGAGCTGTCGATGGAGGTGAAGAGTGTTTGGTTGAATGTGTTAGGCGTGTGATTGGTTCTGGTAGAAATGGATTGAGTCATTTTGGGCTAGTTGGTGGTGCAAAAGAGATGTTTGAGTTGCTTTTTGTTGGAGTGAAGTGCACAAATGACTCACCACAAAATAGGCCTAACATGAAAGAGGTTCTAGCTATGTTGATTAAGATATTCAATTCTCATAGAAATTCAAACTATTGA 3237 0.3828 MSEQDSDSWSFLFLCLLILFSGKLVLGDSLETDKEVLLKLKSYLQNQTVSNKGGYIRWNMNTSNPCDWSGISCSMITGETRVVSVDISASEVAGKMFDHFSELSELAHLDVSWNTLRGEIPEDLMKCSNLVFLNLSHNILEGEMNLTGLRKLKTLDLSTNRLHGDIALSFRNHCDDLVSLNVSDNHFFGRIDECFDECSRLKYLDLSTNNISGALWNGISRLTEFSISENFLTGNVSSQAFPTNCSLEKLDLSVNRFFGKPPKEVANCKNLEILNLSSNKFSGEIPREIGSISGLKSLFLQNNTFSRDIPDTLLNLNNLFILDVSRNNFGGVVQEIFGKFKQLKFLLLHANSYVKGLNESGIFTLTNLTRLNLCFNNFSGPLPAEISQMSGLIFLTLSNNNFNGTIPSELAKLSKLQALELAFNSFSGPIPASLGKLNSLLWLMLANNSLTGQIPHELGNCSSLLWLNLANNKLTGKFPSELTGIGRNAMETFELNQKNLVSVVAGNSECLSMKSWIPANYPPFSFVYSILTRKNCRALWDRLLKGYGIFPMCSSEPSSRSSHKFGYVQLSGNMISGEIPSEIGNMVNFSMLHLGDNRFNGEFPKEIGGLPLIVLNMTRNKFSGEIPTEIGDMKCMQNLDLSWNNFSGAFPTSLVKLDELSRFNISYNPLLSGTVPLTGHLLTFDKDSYLGDALLDLPKFFDNTPDGKNKTLHIQMKKATKWYFFVAITLAILVSGLLSLTVYFLVKSPSEEQRKFLQDKNRKHNDSSSYGSSQWLSDTVKIFHLNNVVFTHADILEATSNFKEERIIGKGGFGTVYKGVFPDGRVVAVKKLQREGTEGEKEFKAEMKVLSGQEFGWPHPNLVTLYGWCLYGSEKLLVYEYIGGGSLEELVTDTKNMTYKRRLEAAIDVAKALVYLHHECYPPIVHRDVKASNVLLDKEGKAKVTDFGLARVVDVGDSHVSTVVAGTVGYVAPEYGLTWQATTKGDVYSFGVLVMELATGRRAVDGGEECLVECVRRVIGSGRNGLSHFGLVGGAKEMFELLFVGVKCTNDSPQNRPNMKEVLAMLIKIFNSHRNSNY 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi531g00012 1078 ProSitePatterns Protein kinases ATP-binding region signature. 808 831 IPR017441 GO:0005524
Vivi531g00012 1078 Gene3D Ribonuclease Inhibitor 355 410 IPR032675 -
Vivi531g00012 1078 ProSiteProfiles Protein kinase domain profile. 802 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi531g00012 1078 SUPERFAMILY Protein kinase-like (PK-like) 783 1066 IPR011009 -
Vivi531g00012 1078 SMART LRR_typ_2 437 461 IPR003591 -
Vivi531g00012 1078 SMART LRR_typ_2 103 127 IPR003591 -
Vivi531g00012 1078 SMART LRR_typ_2 365 389 IPR003591 -
Vivi531g00012 1078 SMART LRR_typ_2 149 172 IPR003591 -
Vivi531g00012 1078 SMART LRR_typ_2 316 339 IPR003591 -
Vivi531g00012 1078 FunFam Putative LRR receptor-like serine/threonine-protein kinase 340 501 - -
Vivi531g00012 1078 Pfam Leucine Rich Repeat 270 289 IPR001611 GO:0005515
Vivi531g00012 1078 FunFam Leucine-rich repeat receptor-like protein kinase 882 1077 - -
Vivi531g00012 1078 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Vivi531g00012 1078 PANTHER LEUCINE RICH REPEAT KINASE 2 342 1069 - -
Vivi531g00012 1078 ProSitePatterns Serine/Threonine protein kinases active-site signature. 924 936 IPR008271 GO:0004672|GO:0006468
Vivi531g00012 1078 Gene3D Ribonuclease Inhibitor 411 509 IPR032675 -
Vivi531g00012 1078 Gene3D Ribonuclease Inhibitor 29 174 IPR032675 -
Vivi531g00012 1078 Gene3D Ribonuclease Inhibitor 554 710 IPR032675 -
Vivi531g00012 1078 Gene3D Ribonuclease Inhibitor 175 354 IPR032675 -
Vivi531g00012 1078 FunFam Nuclear pore complex protein NUP107 30 193 - -
Vivi531g00012 1078 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 238 333 - -
Vivi531g00012 1078 Gene3D Phosphorylase Kinase; domain 1 765 881 - -
Vivi531g00012 1078 Gene3D Transferase(Phosphotransferase) domain 1 883 1077 - -
Vivi531g00012 1078 CDD STKc_IRAK 808 1069 - -
Vivi531g00012 1078 FunFam serine/threonine-protein kinase BRI1-like 2 763 881 - -
Vivi531g00012 1078 SUPERFAMILY L domain-like 58 351 - -
Vivi531g00012 1078 SUPERFAMILY L domain-like 339 672 - -
Vivi531g00012 1078 SMART serkin_6 802 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi531g00012 1078 Pfam Protein kinase domain 802 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi531g00012 11 1066 Receptor kinase-like Gene Family AT1G55610 31.181 1.56e-140 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Vivi531g00012 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi531g00012 - - gmx:100813425 1575.45