Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi531g00011 ATGTCAGAACAAGATTCTGATTCATGGAGTTTCTTGTTTCTCTGTCTCTTGATCCTTTTCTCAGGTAAACTAGTTCTTGGTGATTCATTGGAAACAGACAAAGAAGTACTATTGAAGCTAAAATCCTATTTGCAGAATCAAACAGTTTCAAATAAAGGAGGTTACATAAGATGGAACATGAACACTTCAAATCCTTGTGATTGGTCAGGAATCTCATGCAGCATGATCACAGGAGAAACAAGGGTTGTGAGTGTTGATATTTCAGCGAGCGAGGTGGCAGGTAAGATGTTTGATCATTTTTCTGAGCTAAGCGAACTTGCGCATCTTGATGTCTCGTGGAACACTCTCCGCGGAGAGATTCCCGAGGATTTAATGAAGTGTAGTAATCTTGTGTTTCTCAATTTGTCTCACAATATTCTCGAAGGGGAGATGAATTTGACTGGTTTGAGAAAGTTGAAAACGTTGGATTTGTCCACGAATAGACTTCATGGGGATATTGCGTTGAGTTTTCGTAATCATTGTGATGATTTGGTTAGTTTGAATGTTTCGGATAATCACTTTTTTGGTAGGATTGATGAGTGTTTCGATGAATGTTCGAGGTTGAAGTATTTAGATTTGAGTACAAATAATATAAGTGGTGCTTTATGGAATGGGATTTCGAGGTTGACAGAGTTTTCTATTTCGGAGAATTTTCTAACTGGGAATGTTTCTTCTCAAGCTTTTCCGACGAATTGTAGTCTTGAAAAATTGGATCTTTCTGTCAACAGATTTTTTGGTAAACCGCCTAAAGAAGTTGCAAACTGTAAGAATTTAGAGATTCTCAATCTTTCTAGTAACAAATTTAGCGGTGAAATACCTCGGGAAATTGGTTCGATTTCTGGTCTTAAATCACTGTTCTTGCAGAATAACACCTTTTCAAGAGATATTCCGGATACACTTTTGAATTTGAACAATTTGTTCATTTTGGATGTGAGCAGGAACAACTTTGGTGGTGTGGTACAAGAGATTTTCGGTCCGTTACCAGCTGAAATCTCTCAAATGTCTGGTCTCATATTCTTAACATTAAGCAACAACAACTTTAATGGAACTATTCCGTCTGAATTAGCGAAGTTGAGTAAATTGCAAGCACTTGAACTTGCTTTCAATAGTTTCAGTGGACCAATTCCAGCAAGCTTAGGAAAGTTGAATTCTCTCTTGTGGTTAATGCTTGCAAATAATTCGTTAACCGGTCAAATACCGCATGAGTTAGGTAACTGTTCAAGTTTGTTATGGTTGAACCTTGCAAACAACAAACTCACCGGAAAGTTTCCTTCTGAGTTGACCGGAATTGGAAGAAATGCTATGGAGACGTTTGAATTAAACCAAAAAAATTTGGTCAGTGTTGTTGCTGGAAATAGCGAATGTTTATCGATGAAAAGTTGGATACCTGCTAATTACCCTCCATTCAGTTTTGTGTATAGTATCTTAACACGGAAAAATTGTAGAGCCCTTTGGGATAGATTACTCAAAGGATATGGAATTTTTCCTATGTGTTCATCAGAACCTTCTTCTAGATCATCTCATAAATTTGGTTATGTTCAGTTAAGTGGTAACATGATCAGTGGAGAAATTCCTTCAGAAATCGGGAACATGGTGAATTTCAGTATGTTGCATTTAGGTGACAATAGATTCAATGGCGAATTCCCAAAAGAGATTGGTGGTTTACCACTTATTGTCTTGAACATGACCAGGAACAAATTTTCAGGTGAAATTCCAACTGAAATCGGTGACATGAAGTGCATGCAGAATCTTGATTTGTCTTGGAACAATTTCTCAGGTGCATTTCCGACAAGTTTGGTCAAATTGGATGAGCTTAGCAGGTTCAACATCTCATATAATCCTCTGTTATCTGGTACGGTACCTCTAACCGGACATTTGCTTACTTTTGATAAAGATTCCTATTTAGGCGATGCCCTCTTAGATCTTCCGAAATTCTTTGATAATACCCCAGATGGAAAAAACAAAACATTACACATACAGATGAAAAAAGCAACAAAATGGTATTTTTTTGTTGCTATAACACTAGCTATTTTGGTTTCTGGACTTCTTTCTCTAACTGTCTACTTCTTGGTGAAAAGTCCGTCCGAGGAACAAAGAAAGTTTCTGCAGGATAAAAACCGAAAGCATAATGATTCAAGTAGCTATGGGTCGTCACAATGGTTATCTGATACTGTCAAGATATTCCATTTGAACAATGTAGTTTTCACGCATGCCGACATTTTGGAAGCAACTAGCAACTTCAAAGAAGAGAGAATCATAGGAAAAGGCGGTTTTGGAACGGTTTACAAAGGAGTTTTTCCTGACGGAAGAGTAGTGGCAGTGAAGAAGCTACAAAGGGAAGGAACCGAAGGCGAGAAAGAATTCAAAGCTGAAATGAAAGTCCTTAGTGGTCAAGAATTTGGGTGGCCTCATCCAAATCTTGTCACACTTTACGGTTGGTGCTTATACGGTTCAGAAAAGTTACTAGTTTACGAGTACATAGGAGGTGGAAGTTTGGAAGAGCTAGTAACAGATACGAAAAACATGACTTATAAAAGGCGGTTAGAAGCCGCGATTGATGTGGCTAAAGCGTTAGTTTATTTACACCATGAATGTTACCCACCGATCGTGCACAGAGACGTGAAGGCTAGTAATGTGTTGCTTGACAAAGAAGGCAAAGCAAAAGTAACAGATTTCGGGCTTGCTAGAGTAGTTGATGTTGGTGATAGCCACGTGAGTACAGTTGTTGCTGGAACTGTCGGATATGTTGCACCTGAATATGGACTAACATGGCAAGCTACAACAAAAGGCGACGTGTATAGTTTTGGCGTGTTGGTCATGGAGTTAGCGACCGGGAGAAGAGCTGTCGATGGAGGTGAAGAGTGTTTGGTTGAATGTGTTAGGCGTGTGATTGGTTCTGGTAGAAATGGATTGAGTCATTTTGGGCTAGTTGGTGGTGCAAAAGAGATGTTTGAGTTGCTTTTTGTTGGAGTGAAGTGCACAAATGACTCACCACAAAATAGGCCTAACATGAAAGAGGTTCTAGCTATGTTGATTAAGATATTCAATTCTCATAGAAATTCAAACTATTGA 3111 0.386 MSEQDSDSWSFLFLCLLILFSGKLVLGDSLETDKEVLLKLKSYLQNQTVSNKGGYIRWNMNTSNPCDWSGISCSMITGETRVVSVDISASEVAGKMFDHFSELSELAHLDVSWNTLRGEIPEDLMKCSNLVFLNLSHNILEGEMNLTGLRKLKTLDLSTNRLHGDIALSFRNHCDDLVSLNVSDNHFFGRIDECFDECSRLKYLDLSTNNISGALWNGISRLTEFSISENFLTGNVSSQAFPTNCSLEKLDLSVNRFFGKPPKEVANCKNLEILNLSSNKFSGEIPREIGSISGLKSLFLQNNTFSRDIPDTLLNLNNLFILDVSRNNFGGVVQEIFGPLPAEISQMSGLIFLTLSNNNFNGTIPSELAKLSKLQALELAFNSFSGPIPASLGKLNSLLWLMLANNSLTGQIPHELGNCSSLLWLNLANNKLTGKFPSELTGIGRNAMETFELNQKNLVSVVAGNSECLSMKSWIPANYPPFSFVYSILTRKNCRALWDRLLKGYGIFPMCSSEPSSRSSHKFGYVQLSGNMISGEIPSEIGNMVNFSMLHLGDNRFNGEFPKEIGGLPLIVLNMTRNKFSGEIPTEIGDMKCMQNLDLSWNNFSGAFPTSLVKLDELSRFNISYNPLLSGTVPLTGHLLTFDKDSYLGDALLDLPKFFDNTPDGKNKTLHIQMKKATKWYFFVAITLAILVSGLLSLTVYFLVKSPSEEQRKFLQDKNRKHNDSSSYGSSQWLSDTVKIFHLNNVVFTHADILEATSNFKEERIIGKGGFGTVYKGVFPDGRVVAVKKLQREGTEGEKEFKAEMKVLSGQEFGWPHPNLVTLYGWCLYGSEKLLVYEYIGGGSLEELVTDTKNMTYKRRLEAAIDVAKALVYLHHECYPPIVHRDVKASNVLLDKEGKAKVTDFGLARVVDVGDSHVSTVVAGTVGYVAPEYGLTWQATTKGDVYSFGVLVMELATGRRAVDGGEECLVECVRRVIGSGRNGLSHFGLVGGAKEMFELLFVGVKCTNDSPQNRPNMKEVLAMLIKIFNSHRNSNY 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi531g00011 1036 Gene3D Phosphorylase Kinase; domain 1 723 839 - -
Vivi531g00011 1036 ProSitePatterns Serine/Threonine protein kinases active-site signature. 882 894 IPR008271 GO:0004672|GO:0006468
Vivi531g00011 1036 Gene3D Ribonuclease Inhibitor 29 173 IPR032675 -
Vivi531g00011 1036 Gene3D Ribonuclease Inhibitor 174 240 IPR032675 -
Vivi531g00011 1036 Gene3D Ribonuclease Inhibitor 336 658 IPR032675 -
Vivi531g00011 1036 FunFam serine/threonine-protein kinase BRI1-like 2 721 839 - -
Vivi531g00011 1036 SUPERFAMILY Protein kinase-like (PK-like) 741 1024 IPR011009 -
Vivi531g00011 1036 Pfam Leucine Rich Repeat 270 289 IPR001611 GO:0005515
Vivi531g00011 1036 ProSitePatterns Protein kinases ATP-binding region signature. 766 789 IPR017441 GO:0005524
Vivi531g00011 1036 FunFam Putative LRR receptor-like serine/threonine-protein kinase 333 459 - -
Vivi531g00011 1036 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 245 1026 - -
Vivi531g00011 1036 CDD STKc_IRAK 766 1027 - -
Vivi531g00011 1036 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 238 332 - -
Vivi531g00011 1036 SUPERFAMILY L domain-like 66 285 - -
Vivi531g00011 1036 Gene3D Transferase(Phosphotransferase) domain 1 841 1035 - -
Vivi531g00011 1036 Pfam Protein kinase domain 760 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi531g00011 1036 FunFam Nuclear pore complex protein NUP107 30 193 - -
Vivi531g00011 1036 Gene3D Ribonuclease Inhibitor 241 335 IPR032675 -
Vivi531g00011 1036 FunFam Leucine-rich repeat receptor-like protein kinase 840 1035 - -
Vivi531g00011 1036 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Vivi531g00011 1036 SMART serkin_6 760 1028 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi531g00011 1036 ProSiteProfiles Protein kinase domain profile. 760 1028 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi531g00011 1036 SUPERFAMILY L domain-like 220 632 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi531g00011 194 634 Receptor kinase-like Gene Family AT1G55610 27.664 2.00e-24 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Vivi531g00011 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi531g00011 - - gmx:100813425 1401.34