Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi528g00006 ATGGGCTGTTGTGTCTCAACGAGCAGTCGAAGTACCTGTAGCAGTGGAAGCAACGGAGATATGACAGCTCCATCTTGCTTAGAAGTTGGATTCTGTGGACAAAAGAGAGCAAGAAGAACATTCTCTGACCATGTTATTTCTCTACACCATTTATCATCCTTACCTAGTCGGATTTTCGCTAATGGAAAGAGTCGGGGTTCGTGCATTTTTACGCAGCAGGGTCGCAAGGGAATTAATCAGGATGCCATGGTTGTGTGGGAAGATTTCATGTCCGAAGATATGATCTTTTGTGGTGTCTTTGATGGCCATGGTCCACATGGTCATCTGGTTGCACGCAAAGTGAGGGATACTTTGCCAGTAAAATTGCTTTCATTTTTGCATTCTGATGAATTGAAGCAAAATGAATCAGGCAAAGCTTGTTTCAAACGGAACATAAAACCGGATGGTGGAGACTCTGAAAAGGATTGCTCTGCTGAGGATAAACTGAACTCCACCTGGAGAGAAGCTTTCATGAAAGCATACAAGGCCATGGACAGAGAGCTCAAGTCTCATTCAAATCTAGATTGCTTCTGTAGTGGGAGCACATCTGTGACTATTGTGAAGCAGGGTTCAAATCTTTTCATGGGATATATCGGGGATTCTAGAGCAATAATGGGATCCAAAGACAGCAATGACTCCATGGTGGCAATTCAGTTGACGGTTGATTTGAAGCCTGATTTGCCCAGAGAAGCAGAAAGAATCAAGCAGTGCAAGGGCAGGGTTTTTGCGTTACAAGATGAGCCGGAAGTCTCAAGGGTGTGGTTGCCTTTTGATGATGCACCGGGATTAGCTATGGCTAGAGCATTTGGAGATTTCTGTTTGAAGGAGTATGGTGTGATTTCTATACCTGAATTTTCTCACCGGCTGCTTACAGACAGAGATCAATTCATTGTTCTTGCCTCTGATGGGGTTTGGGATGTTTTAAGTAATGAGGAGGTGGTTGAGATAGTATCGTCGGCACCAACACGATCATCAGCAGCAAGGATTCTGGTAAATTCGGCTGCCCGGGAATGGAAACTCAAGTATCCAACTTCAAAGATGGATGACTGTGCTGTAGTGTGCTTATTTTTGGATGGTAAAATGGACTCAGAATCAGATTATGAAGAACAAGGCTTCTCTTCTGCGACCATTCAGAGCAACCACTCTGGGAATCCAATTGAATCAGATGATGGACAAAAGTCCGAGCCATCTTTGCAACGAAACTTTACTGTGAGATCATCAGAAGAAAATGAGACTTATGCAGCAGTGTCCGTTGATGTTGAAGATGGAACAGCATCAGCTGATGATCAAAACTGGTTAGGTTTGGAAGGGGTCACCCGTGTAAACTCACTCGTCCAACTTCCTAGATTTTCTACAGAAAGGTCAAACTCTTGA 1413 0.4388 MGCCVSTSSRSTCSSGSNGDMTAPSCLEVGFCGQKRARRTFSDHVISLHHLSSLPSRIFANGKSRGSCIFTQQGRKGINQDAMVVWEDFMSEDMIFCGVFDGHGPHGHLVARKVRDTLPVKLLSFLHSDELKQNESGKACFKRNIKPDGGDSEKDCSAEDKLNSTWREAFMKAYKAMDRELKSHSNLDCFCSGSTSVTIVKQGSNLFMGYIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAERIKQCKGRVFALQDEPEVSRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVNSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYEEQGFSSATIQSNHSGNPIESDDGQKSEPSLQRNFTVRSSEENETYAAVSVDVEDGTASADDQNWLGLEGVTRVNSLVQLPRFSTERSNS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi528g00006 470 MobiDBLite consensus disorder prediction 380 424 - -
Vivi528g00006 470 CDD PP2Cc 65 370 IPR001932 -
Vivi528g00006 470 SUPERFAMILY PP2C-like 60 372 IPR036457 -
Vivi528g00006 470 Pfam Protein phosphatase 2C 138 340 IPR001932 -
Vivi528g00006 470 PANTHER PROTEIN PHOSPHATASE 66 368 IPR015655 GO:0004722|GO:0006470
Vivi528g00006 470 Gene3D - 59 372 IPR036457 -
Vivi528g00006 470 MobiDBLite consensus disorder prediction 381 424 - -
Vivi528g00006 470 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Vivi528g00006 470 SMART PP2C_4 50 368 IPR001932 -
Vivi528g00006 470 FunFam probable protein phosphatase 2C 52 57 373 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi528g00006 1 466 PP2C-type Phosphatase Gene Family AT1G03590 68.922 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi528g00006 - - gmx:100798340 860.522