Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi522g00010 ATGGATGTGTTGGATTATGTTTCAGAATATGATTCCGTTGTGTCGGTTTTTGAGAGCAAAACGAGTAAGCTCCACACAACTCATTCTTGGGATTTTCTTAGATTAGGCATCGTCTACAATAGCCGCCATATAGCTGTAGACTCCACATCTAATGTCATTGTTGGTGTCATTGACTCTGGAGTATGGCCGGAATCGGAAAGCTTTAATGATTACGGAATAGGTCCCGTGCCTGAGAAATTCAAGGGAGAGTGTGTTACCGGACATAATTTTACGCTAGCCAATTGCAACAATAAAATCATTGGTGCGCGGTTCTATTCAAAAGGTTTTGAAGCAGAAAACGGTCCTCTAGAAGATGTTGTCAACAAGGTTTTCTTCAGATCAGCTAGAGACAGTGATGGACATGGAACACACACAGCTTCCACCATTGCGGGATCCATTGTTGCTAATGCTAGCTTATTCGGCATTGCCAAAGGAACAGCTAGAGGCGGTGCTCCAAGTGCAAGACTTTCTATCTACAAGGCCTGTTGGTTTGGATTTTGCAGCGATGCTGATGTTCTTTCCGCTATCGATGATGCCATTCATGACGGTGTTGACATACTTTCCCTCTCCTTTGGTCCTAATCCTCCGCAGCCAAACTACTTCGAGGACGCAGTCAGTGTCGGAGCATTCCATGCATTCCAAAAGGGAATTCTTGTTTCTGCTTCTGCAGGAAACTCAGTTTTTCCTCGAACGGCTTGCAATGTTGCTCCTTGGATCCTCACTGTTGCTGCTAGCTCGTTAGATAGAGAATTCAGTTCAAATATCTACCTTGGTAACTCAAAAGTTTTGAAGGGTTTTTCTCTAAATCCAATAAAAATGGAGAGTTTTCATGGTTTGATATATGGAAGTGCAGCGGCAGCTTCTGGAGTTCCAGCAACAAATGCTAGCTTCTGCAAGAGTAATACTCTCGATCCTACCTTAATCAACGGAAAAATTGTTATCTGCACAATTGAAACATTCATTGACAATAGAGAAGAAAAATCCATCATAGTAAAGCAAGGTGGTGGTGTTGGAATGATACTTATTGACCATAATGCCAAAGAAGTTGGTTTTCAGTTTGTCATCCCAAGCACTATTATTGGTCAGGATTCTGTAGAAGAGCTTCAAGCATACATAAACACAGATAAGAACCCTATTGCTAAAATCATCCCAACAGTAACTGTTGTTGGTACCAAACCTGCTCCAGAAGTTGCAGCTTTTTCTTCCATGGGGCCAAATATAATAACACCAGATATTATCAAGCCTGATATCACAGGACCTGGACTGAATATTCTGGCAGCATGGTCTCCGGTGGCTACTGAAGCCACAGTCGAACAACAATCTGTCGACTATAACATCATTTCAGGAACATCAATGTCTTGTCCACACATATCCGCAGTTGCAGCAATCATCAAATCTTACCACCCAACATGGTCTCCTGCAGCTATAATGTCCGCAATAATGACTACAGCAACAGTAATTGATAACACAAACCACCTCATAGGAAGAGATCCAAACGGAACTCAAACAACTCCATTCGACTACGGATCCGGACACATAAATCCACTTGCATCGCTCAATCCTGGACTAGTATACGATTTTGATTCCCAAGATGCTCTCGATTTTCTCTGCAGCAATGGAGCAAGTCCATTGCAGCTTAGAAACATCACTGGTGTACTTACTCAATGCCAGAAAACTTCCACACCTTCCTACAACTTCAACTACCCTTCAATCGGTGTATCGAATTTGAATGGAAGTTTATCTGTTTATCGAACCGTTACATACTATGGTCGGGAACCAGCAGTGTATGTTGCAAGTGTTGAAAATCCATCTGGTGTGAATGTTAAAGTTACACCAGTGGGATTGAAGTTCTCGAAAACGGGAGAGAGGATAACTTTTAGGATTGATATTGTCCCTTTCAAGAATAGTAATGGAAACTTTGTGTTTGGTGCCTTGACATGGAAGAATGGTAGACAAAATGTAAGGAGTCCTATTGGTGTTAATGTAGTATCTACATAG 2037 0.4188 MDVLDYVSEYDSVVSVFESKTSKLHTTHSWDFLRLGIVYNSRHIAVDSTSNVIVGVIDSGVWPESESFNDYGIGPVPEKFKGECVTGHNFTLANCNNKIIGARFYSKGFEAENGPLEDVVNKVFFRSARDSDGHGTHTASTIAGSIVANASLFGIAKGTARGGAPSARLSIYKACWFGFCSDADVLSAIDDAIHDGVDILSLSFGPNPPQPNYFEDAVSVGAFHAFQKGILVSASAGNSVFPRTACNVAPWILTVAASSLDREFSSNIYLGNSKVLKGFSLNPIKMESFHGLIYGSAAAASGVPATNASFCKSNTLDPTLINGKIVICTIETFIDNREEKSIIVKQGGGVGMILIDHNAKEVGFQFVIPSTIIGQDSVEELQAYINTDKNPIAKIIPTVTVVGTKPAPEVAAFSSMGPNIITPDIIKPDITGPGLNILAAWSPVATEATVEQQSVDYNIISGTSMSCPHISAVAAIIKSYHPTWSPAAIMSAIMTTATVIDNTNHLIGRDPNGTQTTPFDYGSGHINPLASLNPGLVYDFDSQDALDFLCSNGASPLQLRNITGVLTQCQKTSTPSYNFNYPSIGVSNLNGSLSVYRTVTYYGREPAVYVASVENPSGVNVKVTPVGLKFSKTGERITFRIDIVPFKNSNGNFVFGALTWKNGRQNVRSPIGVNVVST 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi522g00010 678 Pfam PA domain 308 381 IPR003137 -
Vivi522g00010 678 ProSitePatterns Serine proteases, subtilase family, serine active site. 462 472 IPR023828 -
Vivi522g00010 678 Gene3D - 549 676 - -
Vivi522g00010 678 Gene3D Peptidase S8/S53 domain 51 544 IPR036852 GO:0004252|GO:0006508
Vivi522g00010 678 Pfam Fibronectin type-III domain 578 673 IPR041469 -
Vivi522g00010 678 PRINTS Subtilisin serine protease family (S8) signature 49 68 IPR015500 -
Vivi522g00010 678 PRINTS Subtilisin serine protease family (S8) signature 461 477 IPR015500 -
Vivi522g00010 678 PRINTS Subtilisin serine protease family (S8) signature 130 143 IPR015500 -
Vivi522g00010 678 FunFam Subtilisin-like protease SBT1.5 51 275 - -
Vivi522g00010 678 CDD PA_subtilisin_like 267 395 - -
Vivi522g00010 678 Gene3D - 261 402 - -
Vivi522g00010 678 SUPERFAMILY Subtilisin-like 24 536 IPR036852 GO:0004252|GO:0006508
Vivi522g00010 678 FunFam subtilisin-like protease SBT1.5 261 402 - -
Vivi522g00010 678 CDD Peptidases_S8_3 23 498 IPR034197 -
Vivi522g00010 678 ProSiteProfiles Serine proteases, subtilase domain profile. 29 532 - -
Vivi522g00010 678 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 9 671 IPR045051 -
Vivi522g00010 678 Pfam Subtilase family 50 510 IPR000209 GO:0006508|GO:0008236
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi522g00010 2 675 Subtilisin-like Serine Gene Family AT2G04160 44.286 4.77e-180 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi522g00010 - - pvu:PHAVU_011G092600g 1132.09