Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi522g00001 ATGGCGGAAGAACATCGATGCCAAGCTCCGCGTCTCTGCGCTAACAACTGCGGTTTCTTCGGGAGTCCCGCCATGCAGGATCTCTGTTCTAAATGTTACCGTGATTTGCAGCTCAAGGAACAGCGATCTTCGTCGGCGAAACTGGTTCTCAATCAAACCCTGATTTCTCCTCCTCAAGCGGTGGTTTCTCAGGAGGTTGTTGTTGTTCAGCCTTCTTCTCCGGAGGCGGTGGTTGAGTCTTTACCGGTGGCGGTGGAGACTGTTGTTGGCACATCGGTGCAGGCGAATCCGAACCGGTGCGGGAACTGTAGGCGGCGCGTGGGGCTGACGGGATTCAAGTGCAGGTGTGGATTGACCTTGTGTGGGTCCCACAGGTATCCGGAGCAACACGGGTGTGAGTTTGATTTTAAGGGGATGGGGAGAGAGCAGATCAAGAAGGCGAATCCGGTGGTGAAGGGAGAAAAGTTGAACAAGATTTGA 480 0.5417 MAEEHRCQAPRLCANNCGFFGSPAMQDLCSKCYRDLQLKEQRSSSAKLVLNQTLISPPQAVVSQEVVVVQPSSPEAVVESLPVAVETVVGTSVQANPNRCGNCRRRVGLTGFKCRCGLTLCGSHRYPEQHGCEFDFKGMGREQIKKANPVVKGEKLNKI 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi522g00001 159 ProSiteProfiles Zinc finger AN1-type profile. 94 140 IPR000058 GO:0008270
Vivi522g00001 159 Gene3D - 1 56 - -
Vivi522g00001 159 PANTHER AN1-TYPE ZINC FINGER PROTEIN 9 159 - -
Vivi522g00001 159 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Vivi522g00001 159 SUPERFAMILY AN1-like Zinc finger 92 154 IPR035896 -
Vivi522g00001 159 FunFam Zinc finger AN1-type containing 6 76 155 - -
Vivi522g00001 159 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Vivi522g00001 159 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Vivi522g00001 159 SMART AN1_Zf_4 100 137 IPR000058 GO:0008270
Vivi522g00001 159 Gene3D - 75 155 IPR035896 -
Vivi522g00001 159 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 58 - -
Vivi522g00001 159 Pfam AN1-like Zinc finger 100 136 IPR000058 GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi522g00001 1 159 C2H2 Transcription Factor Family AT3G52800 50.000 6.39e-45 143