Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi516g00006 ATGGCTACAGCTGCAACTATGATAGGAGGTGCTTTTCTCTCTGCAACTGTTCAAACCTTAGTTGAGAAACTGGCCTCAACAGAGTTTCTTGATTACATTAGAAACACCAAGATCAATGTCACACTCTTGAGAAAGTTCCAAACAACCCTGCTCACTCTTCAGGCTGTGCTGGATGATGCAGAAGAGAGGCAGATCAACACTCTTGCTGTCAAAAAGTGGCTAGATGACTTGAAAGATGTTGTCTTAGATGCTGAGGATTTGGTCGGTGAAATAAGTTACGACTCTCTTCGGTGCAAGATGGAGAATAGACAAGCTGGAAGCAGAACTAATCAGGTGTTGAGTTTTCTTTCATCTCCTTTCAAAAACTTCTATAGAGACATCAATTCCCAGTTGAAGATCATGTGTGAAACACTTGAACCTTTTGCACAACATAAAGATACCCTTGGATTGCAAACAAAAAGTGCTAGAGTTTCTCGAAGACCACCTTCAAGTTCAGGGGTTAATGAATCTGTCATGTTTGGTAGGAATGATGATAAAGATACAATCATCAATATGCTTTTATCAAACTGTGGCACCAGCAAAAATAATAATTTAAGTGTTGTCGCAATTTTGGGTATGGGCGGTGTTGGAAAAACAACCCTTGCACAACTTGTTTACAATGATGAAAAAGTTGAACAGCATTTTGATTTCAAAGTCTGGGTTTGTGTATCAGAGGGCTTTGATGTTGTGAGAGTAACTAAATCTCTCCTTGAATCAGTTGTTAGAAATACAACATCTGATGCTTCAAAGGTATGGAAAAGCGATAATCTTGACATTCTTCGAGTTGAATTAAATAAAAACACGAGGAAGAAAAGATTTTTGATTGTGCTAGACGATTTGTGGAATGATAGTTACAATGAATGGGATGAGCTACTCAGTCCACTTGTTGATGGAAAACCTGGAAGTTCGGTGATTATAACAACGCGTCAACAAAAAGTTGCAGAGATGGCAAAGACATTTCCTATTTATAAATTAGACCCTCTGTCACATGAAGATTGTTGGTCTATACTCTCAAAACATGCATTGGGAAATGATGAATATCACGACAGTAAAAACATAGCCCTTGAAGAGATTGGTAGGAAGATTGCAAGAAAGTGTGGTGGATTGCCAATAGCTGCTAAAACACTAGGAGGACTTCTACGTTCAAGGGTAGACACAAAGGAGTGGACTGATATTTTGAACAGTAACGTATGGAACTTACCAAATGATAATATAATGCCTGCTTTGCATTTGAGTTACCAATATCTTCCCTCTCATTTGAAAAGATGTTTTTCGTATTGTTCAATTTTTCCAAAACATTATCCACTTGATAGGAATAAATTGGTTTTGTTATGGATGGCAGAGGGCTTCCTTGATTGTTCCCAAGGGGGAAAATTGGAGGAGGAATTAGGTGATGATTGCTTTGCTGAATTGTTGTCTAGATCCTTAATTCAACAATCAAATGATGGTGCTCATGGAAAATTGTTTTTCATGCATGATCTTATCAATGACTTAGCTTCAACGGTATCTGGAAAAATTTGTTGTCGGTCTGAATGTGGTGGCATTTCTGCAGAGGTTCGACATTTGTCATATATTCAAGAAGAGCAAGATATTTTCATGAAGTTTATGCCTTTCTACAATTTTAAATGCTTGCGAAGCTTCCTACCCATTAGTTTTTGGAGGTCACACAATTACTTATCCGTCAAGGTGGTTGATGATTTGCTACCACTACTTAAAAGGTTGCGCGTGTTATCGCTATCACAATATACAAACATCACCAAGCTACCAAATTCAATTGGAAATTTGGTGCAGTTGCGGTATCTAGATCTTTCCCACACTAAAATCAAAAGCTTGCCAGAGACAATATGTAACATTTACAATCTGCAAACCTTGATTTTATTTGATTGCTACAGTCTGACTGAATTGCCAAAGCATATGGGAAATTTAATTAACTTACATCACCTTGATATAAGTGGAACTGGCATAAAAGAGTTGCCTGCGGAAATTGGTGGACTAGAAAACCTCCAAACTTTGACTGTTTTTTTAGTGGGTAGGCGACTTGAAGGGTTAAGTATCAAAGAGCTAAGGAAGTTCCCAAACCTACAAGGAAAAATCACCATAAAAAACCTACATAATGTTGTTGATGCAAAAGAGGCAGAAGATGCCAACCTGAAAAGCAAAGTGAAAATTGAGAAGTTGAAGTTGATATGGGGGGAAATAAGTGAAGACTCAGTAAAAGTAAAAGTTGTGCTTGAAATGTTACAACCACCAATATACCTGAAGAGACTTAAAATTGACTTATATGGTGGGACAAGTTTTCCGAATTGGTTGGGAAATTCTCTGTTTTCTAACATGGTGTCCCTTAGCATTCATAATTGTGAATATTGCATGACACTTCCACCGCTAGGCCAATTACCTTCCCTCAAGAAGCTGAGTATATCGAATTTGTTGTTATTGGAGACAATTGGCCGAGAATTCTATTGTATTGAGGAAGGAGAATGTTCCAATTCTACCTTCCAACCATTTCCATCCCTTGAATACATGCAATTTCACAAAATGCCAAATTGGAAGGAATGGCTTCCTTTTGAAGGCATAAATTTTGCATTTCCTCGACTTAGAACTATGGAGTTACGCAATTGTCCCGAACTAAGAGGGCATTTGCCTAACCACCTTTCTTGCATGGAAGAAATTGAAATGGAAGGTTGTTATAATCTATTGGAAACACCACATACTCTGCATTGGTTGGCGTCAATCAAAAGAGTAAAAATTACAGATAATTCAATTGATGGAGATAGGAGGAGCACTCAATGGTTAATACTTGAGGTTGGCTCTCCATTGCAACATGCAACTTTTGGAAGTTTCCCAATGTCTATTCCTAAAATGATTATGCGTAGCGCTTTTCTTACTCACTTGGATCTCTGTCATATTGAGTCTCTCACTGCATTTCCCACAAATGGTCTACCCACTTCATTGCAGTCACTTTATATTCATGGGTGTAGGAAGTTATCCTTCATGCCTTTTGAAACATTTCAAAATTACACATCACTTGTGAGTCTTGAATTGTGGGATAGTTGTGATTCACTTACATCATTTCCACTTGATGGTTTCCCTGCACTCCAAACACTCCGCATATTCGGTTGTAGGAGTATGAATTCCGTTTTTCTTTTAGAAAGTCCTTCACGTCGATATTCAACCCTCCGATCACTTGAAATCGTATCACAACGCTCAAATAAATCACTTAAAGTCAATCTTCGGTTGGACACACTCACAAACCTTGAAGATTTGGGTCTGAGATGTCCTGGAGAGTTGTCATTTTGTGAAGGAGTTTGTTTACCCCCCAAATTACAATCAATTTCTTTCCAAGGAACAATGTTGCATGTAAAGGAATGGGGTCTCCAAGACCTAACTGCTCTTTCAAGATTGACAATTCGAGAAAGGGGTGAAATGCATAACACCTTGACAATGGATTGGATCCTTCCCATCTCCCTTGTGTCTCTCACTGTCGAAGGTAATGTGTCCTTTGAAGTAAATGGGTTTCGACACCTGTCCTCTCTCGAAAATCTCCACTTTCATCAATGTCAGCATCTCAAGTCATTGCCAGAAAACTGCCTTCCTTCCTCGCTGAAATCACTTCAATTTCTTTTCTGTAAACAACTTGAGTCATTACCAGAAGACAGCCTCCCTTCCTCTCTGAAGAAACTGACAGTCGATGGATGTCCTCTGTTAGAAGAAATTCCCACAAATGGTCTGCCCACTTCATTGCAGTCACTTTATATTGATGGTTGTCCGCATCTCAAGTCATTGCCAGAAAACTGTCTTCCTTCCTCGCTGAAATCACTTGTATTTGTTGATTGTAAGCAACTAGAGTCATTACCAGAAGACAAACTCCTTACCTCTCTCAAGAAACTTACCATCATTGGTTGCCCTTTGTTAGATGAAAGGTATAAAATGAAGCAAAACTGGTCCAAAATTGCTCACATTCCTGTCATACAAATAAATGACCAACTCACAATATGA 4035 0.3859 MATAATMIGGAFLSATVQTLVEKLASTEFLDYIRNTKINVTLLRKFQTTLLTLQAVLDDAEERQINTLAVKKWLDDLKDVVLDAEDLVGEISYDSLRCKMENRQAGSRTNQVLSFLSSPFKNFYRDINSQLKIMCETLEPFAQHKDTLGLQTKSARVSRRPPSSSGVNESVMFGRNDDKDTIINMLLSNCGTSKNNNLSVVAILGMGGVGKTTLAQLVYNDEKVEQHFDFKVWVCVSEGFDVVRVTKSLLESVVRNTTSDASKVWKSDNLDILRVELNKNTRKKRFLIVLDDLWNDSYNEWDELLSPLVDGKPGSSVIITTRQQKVAEMAKTFPIYKLDPLSHEDCWSILSKHALGNDEYHDSKNIALEEIGRKIARKCGGLPIAAKTLGGLLRSRVDTKEWTDILNSNVWNLPNDNIMPALHLSYQYLPSHLKRCFSYCSIFPKHYPLDRNKLVLLWMAEGFLDCSQGGKLEEELGDDCFAELLSRSLIQQSNDGAHGKLFFMHDLINDLASTVSGKICCRSECGGISAEVRHLSYIQEEQDIFMKFMPFYNFKCLRSFLPISFWRSHNYLSVKVVDDLLPLLKRLRVLSLSQYTNITKLPNSIGNLVQLRYLDLSHTKIKSLPETICNIYNLQTLILFDCYSLTELPKHMGNLINLHHLDISGTGIKELPAEIGGLENLQTLTVFLVGRRLEGLSIKELRKFPNLQGKITIKNLHNVVDAKEAEDANLKSKVKIEKLKLIWGEISEDSVKVKVVLEMLQPPIYLKRLKIDLYGGTSFPNWLGNSLFSNMVSLSIHNCEYCMTLPPLGQLPSLKKLSISNLLLLETIGREFYCIEEGECSNSTFQPFPSLEYMQFHKMPNWKEWLPFEGINFAFPRLRTMELRNCPELRGHLPNHLSCMEEIEMEGCYNLLETPHTLHWLASIKRVKITDNSIDGDRRSTQWLILEVGSPLQHATFGSFPMSIPKMIMRSAFLTHLDLCHIESLTAFPTNGLPTSLQSLYIHGCRKLSFMPFETFQNYTSLVSLELWDSCDSLTSFPLDGFPALQTLRIFGCRSMNSVFLLESPSRRYSTLRSLEIVSQRSNKSLKVNLRLDTLTNLEDLGLRCPGELSFCEGVCLPPKLQSISFQGTMLHVKEWGLQDLTALSRLTIRERGEMHNTLTMDWILPISLVSLTVEGNVSFEVNGFRHLSSLENLHFHQCQHLKSLPENCLPSSLKSLQFLFCKQLESLPEDSLPSSLKKLTVDGCPLLEEIPTNGLPTSLQSLYIDGCPHLKSLPENCLPSSLKSLVFVDCKQLESLPEDKLLTSLKKLTIIGCPLLDERYKMKQNWSKIAHIPVIQINDQLTI 1344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi516g00006 1344 FunFam Probable disease resistance protein At1g61300 155 332 - -
Vivi516g00006 1344 Gene3D - 16 133 - -
Vivi516g00006 1344 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 440 IPR027417 -
Vivi516g00006 1344 Gene3D - 162 333 IPR027417 -
Vivi516g00006 1344 SUPERFAMILY L domain-like 504 940 - -
Vivi516g00006 1344 Gene3D Ribonuclease Inhibitor 950 1164 IPR032675 -
Vivi516g00006 1344 Gene3D Ribonuclease Inhibitor 566 948 IPR032675 -
Vivi516g00006 1344 Gene3D Ribonuclease Inhibitor 1165 1339 IPR032675 -
Vivi516g00006 1344 SMART LRR_typ_2 608 631 IPR003591 -
Vivi516g00006 1344 SMART LRR_typ_2 655 678 IPR003591 -
Vivi516g00006 1344 SMART LRR_typ_2 1188 1212 IPR003591 -
Vivi516g00006 1344 PANTHER DISEASE RESISTANCE PROTEIN RP 45 881 IPR044974 GO:0006952
Vivi516g00006 1344 Pfam Rx N-terminal domain 12 106 IPR041118 -
Vivi516g00006 1344 Gene3D - 340 424 IPR042197 -
Vivi516g00006 1344 MobiDBLite consensus disorder prediction 152 171 - -
Vivi516g00006 1344 Pfam NB-ARC domain 177 407 IPR002182 GO:0043531
Vivi516g00006 1344 FunFam Probable disease resistance protein At1g63360 426 514 - -
Vivi516g00006 1344 Coils Coil 43 63 - -
Vivi516g00006 1344 PRINTS Disease resistance protein signature 379 393 - -
Vivi516g00006 1344 PRINTS Disease resistance protein signature 280 294 - -
Vivi516g00006 1344 PRINTS Disease resistance protein signature 606 622 - -
Vivi516g00006 1344 PRINTS Disease resistance protein signature 200 215 - -
Vivi516g00006 1344 ProSiteProfiles Leucine-rich repeat profile. 610 631 IPR001611 GO:0005515
Vivi516g00006 1344 Gene3D - 425 514 IPR036388 -
Vivi516g00006 1344 SUPERFAMILY L domain-like 964 1327 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi516g00006 596 764 WRKY Transcription Factor Family AT4G12020 31.285 3.77e-09 59.7