Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi516g00005 ATGGCTGCAGCTGCAACTATGATAGGAGGTGCTTTTCTCTCTGCAACTCTTCAAACCTTAGTTCAGAAACTGGCCTCAACTGAGTTTCTTGATTACATCCGAAACACCAAGCTGGATGTCTCCCACTTGAGAAAGTTACAAACAACCCTGCTCACTCTTCAGGCTGTGCTGGATGATGCAGAAGAGAGGCAGATCAACAATCTTGCTGTCAAAAAATGGCTAGATGACTTGAAAGATGTTGTCTTAGATGCTGAGGATTTGGTCGGTGAAATAAGTTACGACTCCCTTCGATGTAAGATGGAGAATACACAAGTTGGAAACAGAACTAATAAGGTGTGGAACTTTCTTTCATCTCCTTTTAAAAACTTCTATAGAGATATCAATTCCCAATTGAAGATCATGTGTGAAACCCTTGAACCTTTTGCACAACATAAAGATACCCTTGGATTGCAAACAAAAAGTGCTAGAGTTTCTCGTAGACCACCTTCAAGTTCAGGGGTTAATGAATCTGTCATGGTGGGTAGGAATGATGATAAAGATACAATCATTAATATGCTTGTATCAGATAGTGGCACCAGAAAAAATAATAATTTAGACGTTGTTGCAATTTGGGGTATGGGAGGTGTGGGAAAAACGACCCTTGCACAACTTGTTTACAATGATGAAAAAGTTGAACAACATTTTGATTTCAAAGTCTGGGTTTGTGTATCAGAAGACTTTGATCTTGTGAGAGTAACCAAATCTCTCCTTGAATCAGTTGTTAGAAATACAACATCTAATGCTTCAAAGGTATGGAAAAGCGATAATCTTGACATTCTTCGAGTTGAATTAAATAAAAACACGAGGAAGAAAAGATTTTTGATTGTGTTGGATGATTTGTGGAATGATAGTTACAATGACTGGGATGAGCTAGTAAGTCCCCTTGTTGATGGAGAACCTGGAAGTTCGGTGATTATAACAACGCGTCAACAAAAAGTTGCAGAGATGGCAAAGACATTTCCTATTTATAAATTAGACCCTCTGTCACATGAAGATTGTTGGTCTATACTCTCAAAACATGCATTGGGAAATGATGAATATCACGACAGTAAAAACATAGCCCTTGAAGAGATTGGTAGGAAGATTGCAAGAAAGTGTGGCGGATTGCCAATAGCTGCTAAAACACTGGGAGGACTTCTACGTTCAAGGGTAGACACAATGGAATGGACTAGGATTTTAAACAGTGATGTATGGAACTTACCAAATGATAACATTATGCCTGCTTTACATTTGAGTTACCAATATCTTCCATCTCATTTGAAAAGATGTTTTTCATATTGTTCAATTTTTCCAAAGGATTATCCACTTGATAAGAAGAAATTGATTTTGTTGTGGATGGCAGAGGGTTTCCTTGATTGTTCTCAAGCAGGTAAATTGGCGGAGGAAGTAGGTGATGAATGCTTTATTGGATTGTTGTCTAGATCCTTAATTCAACAGTCGAACGGTGGAGCTCGAGGAAAATATTATTTCATGCATGACCTTATCAACGACTTAGCTACTGCCGTATCTGGAAAAATTTGTGGTCAGTTTGAATGTGGTGACATCTCTGAAAAGGTTCGTCATTTATCATATATTCAAGAAGATTATGATATTTTCATGAAGTTTAACCACTTCTACAATTTTAAATGCTTGCGAAGTTTCCTTCCTATTTCCCATCATATGTGGCCTAAATACTTATCCCTCAAGGTGGTTGATGATTTGCTACCAACAATGAAAAGGTTGCGGGTGTTATCACTATCAAAGTATGTAAACATCATCAATCTACCGGATTCAATTGGCAATTTGGTGCAATTGCGGTATCTAGATTTGTCCTTCACTGAAATCAAAAGCCTGCCTGATACAATATGTAACCTTCATAATTTGCAAACCTTGATTTTATTAGGTTGCAACTGTCTCACTGAATTGCCAGTGCATATTGGAAATTTAATCAGTTTACGTCACCTTGATATAAGTGAGACTGACATAAAAGAGTTGCCTACGGAAATTGGTGGACTAGAAAACCTCCAAACTTTGACTATTTTTTTAGTGGGTAAGCGACATGAAGGGTTAAGTATCAAAGAACTAAGAAAATTTCCAAACCTACAAGGAAAATTTACCATCAAAAACCTATACAATGTGGTTGACGCAAAAGAGGTAGAAGCTGCCAACCTGAAAAACAAAGAGAAAATTGAGGAGTTGGAGTTGATATGGGGAAAACAAAGTGAAGATTCACTAAAAGTGAAAGATGTGCTTGAAATGTTGCAACCACCAATAAACTTAAAGAGCCTACTTATTGATTTGTATGGAGGGACAAGTTTTCCGAGATGGCTTGGAAATTCTTTGTTTTCTAACATGGTGTCCATTAACATCCATAATTGTGAATATTGCTTGACACTTCCACCGCTAGGGCAACTACGCTATCTCAAGGAGCTGAGTATATCTAATTTGTTGTTATTGGAGACAATTGGACCAGAGTTCTATTGTGTTCAAGAAGAAGAATGTTCAGATTCTAGCTTCCTACCATTTCCGTCCCTTGAGCATATGAAATTTCACTGCATGCCAAATTGGAAATATTGGCATCCCTTTGAAGGCATAAATTGTGCTTTTCCTCGACTTCGAACAATGGAGTTCCATTATTGTCCTGAACTAAAGGGACATTTGCCTAGCAAGCTTTCTTGCATGGAAGAAATTAAAATAAGGGATTGTTATAATCTATTGGAAACATCACATACTTTGAATTGGCTATCGTCAATCAAAAAAGTAAACATTGAAGAAGATTTAGATTCTGAAGTGTATGCTCAAAGCACTCAATGGTTAATGCTTGAGACTGAATCTCTGTTGCAACATGCAACTTTTGAAAGTTACCCAATGTCTATGCCTAAAATGATTATGAGTAGCGTTTGTCTTACTCACTTGGAACTCTATCGTATCCCGTCTCTTACTACATTTCCTACAAATGGTCTTCCCACTTCATTGCAGTCACTTCGTATTGAAGGGTGTAGGAAGTTATCCTTAATGCCTCCCGAAACTTGGAGAAATTACACATCCATGACAAGTCTAGATATATGTGAGAGTTGTGATGCGCTTACGTCCTTTCCACTTAACGGTTTCCCTGCACTCCAAACACTTTCCATTAGTATATGTAGAGGTTTGAATTCCATTTTCAATTTAGAAAGTTTACCTTGGCCGTCAAGCCTCCGGTCACTTACAATCATCTCCCGTAGAGCAATTGAAGTCAATCTTCGGATGGACACACTCACTGTTCTTGAACATTTGTATCTGAGTTGTGGAGAGTTGTCATTTCGTGAAGGAGTTTGTCTACCTCCCAAATTACAATCAATTTATATTTATTTTGCAAGAACAATGCCGCATGTAAAGGAATGGGGTCTCCAAGACCTTACCGCTCTTTCAAGATTGAGAATTCGAGAAAGGAGTGAAATGGATAACACCTTGATGGACGATTCGTTGCTCCCCATCTCCCTTGTGTCTCTCAGTGTCAGTGGTAATATGTCCTTTGAAAGAAATGGGCTTCGAAACCTCTCCTCTCTCGAAGATCTCCGATTTGATCGTTGTCTACATTTCAACTCATTGCCGGAAAACTGCTTTCCTTCCTCGCTGAAATCACTTGAATTTAGTTTTTGTGACAAACTTGAGTCATTTCCAGAAGACAACCTCCCTACCTCTCTTAAGCGACTGACCATCAGACGTTGCCCATTGTTAGAAGAAAGGTATAAAAGGAAGGAAAATTGGTCCAAAATTGCTCACATTCCTGTCATACAAATAAATGACCAACTCACAATATGA 3822 0.382 MAAAATMIGGAFLSATLQTLVQKLASTEFLDYIRNTKLDVSHLRKLQTTLLTLQAVLDDAEERQINNLAVKKWLDDLKDVVLDAEDLVGEISYDSLRCKMENTQVGNRTNKVWNFLSSPFKNFYRDINSQLKIMCETLEPFAQHKDTLGLQTKSARVSRRPPSSSGVNESVMVGRNDDKDTIINMLVSDSGTRKNNNLDVVAIWGMGGVGKTTLAQLVYNDEKVEQHFDFKVWVCVSEDFDLVRVTKSLLESVVRNTTSNASKVWKSDNLDILRVELNKNTRKKRFLIVLDDLWNDSYNDWDELVSPLVDGEPGSSVIITTRQQKVAEMAKTFPIYKLDPLSHEDCWSILSKHALGNDEYHDSKNIALEEIGRKIARKCGGLPIAAKTLGGLLRSRVDTMEWTRILNSDVWNLPNDNIMPALHLSYQYLPSHLKRCFSYCSIFPKDYPLDKKKLILLWMAEGFLDCSQAGKLAEEVGDECFIGLLSRSLIQQSNGGARGKYYFMHDLINDLATAVSGKICGQFECGDISEKVRHLSYIQEDYDIFMKFNHFYNFKCLRSFLPISHHMWPKYLSLKVVDDLLPTMKRLRVLSLSKYVNIINLPDSIGNLVQLRYLDLSFTEIKSLPDTICNLHNLQTLILLGCNCLTELPVHIGNLISLRHLDISETDIKELPTEIGGLENLQTLTIFLVGKRHEGLSIKELRKFPNLQGKFTIKNLYNVVDAKEVEAANLKNKEKIEELELIWGKQSEDSLKVKDVLEMLQPPINLKSLLIDLYGGTSFPRWLGNSLFSNMVSINIHNCEYCLTLPPLGQLRYLKELSISNLLLLETIGPEFYCVQEEECSDSSFLPFPSLEHMKFHCMPNWKYWHPFEGINCAFPRLRTMEFHYCPELKGHLPSKLSCMEEIKIRDCYNLLETSHTLNWLSSIKKVNIEEDLDSEVYAQSTQWLMLETESLLQHATFESYPMSMPKMIMSSVCLTHLELYRIPSLTTFPTNGLPTSLQSLRIEGCRKLSLMPPETWRNYTSMTSLDICESCDALTSFPLNGFPALQTLSISICRGLNSIFNLESLPWPSSLRSLTIISRRAIEVNLRMDTLTVLEHLYLSCGELSFREGVCLPPKLQSIYIYFARTMPHVKEWGLQDLTALSRLRIRERSEMDNTLMDDSLLPISLVSLSVSGNMSFERNGLRNLSSLEDLRFDRCLHFNSLPENCFPSSLKSLEFSFCDKLESFPEDNLPTSLKRLTIRRCPLLEERYKRKENWSKIAHIPVIQINDQLTI 1273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi516g00005 1273 Gene3D Ribonuclease Inhibitor 564 956 IPR032675 -
Vivi516g00005 1273 Gene3D - 162 333 IPR027417 -
Vivi516g00005 1273 Gene3D Ribonuclease Inhibitor 1107 1262 IPR032675 -
Vivi516g00005 1273 FunFam Probable disease resistance protein At1g63360 426 514 - -
Vivi516g00005 1273 SMART LRR_typ_2 655 678 IPR003591 -
Vivi516g00005 1273 SMART LRR_typ_2 608 631 IPR003591 -
Vivi516g00005 1273 FunFam Probable disease resistance protein At1g61300 155 332 - -
Vivi516g00005 1273 Gene3D - 340 424 IPR042197 -
Vivi516g00005 1273 Gene3D - 16 133 - -
Vivi516g00005 1273 SUPERFAMILY L domain-like 971 1248 - -
Vivi516g00005 1273 SUPERFAMILY L domain-like 504 930 - -
Vivi516g00005 1273 MobiDBLite consensus disorder prediction 152 171 - -
Vivi516g00005 1273 Gene3D Ribonuclease Inhibitor 957 1106 IPR032675 -
Vivi516g00005 1273 PRINTS Disease resistance protein signature 280 294 - -
Vivi516g00005 1273 PRINTS Disease resistance protein signature 200 215 - -
Vivi516g00005 1273 PRINTS Disease resistance protein signature 629 645 - -
Vivi516g00005 1273 PRINTS Disease resistance protein signature 379 393 - -
Vivi516g00005 1273 Coils Coil 43 63 - -
Vivi516g00005 1273 PANTHER DISEASE RESISTANCE PROTEIN RP 43 908 IPR044974 GO:0006952
Vivi516g00005 1273 Pfam Rx N-terminal domain 12 105 IPR041118 -
Vivi516g00005 1273 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 440 IPR027417 -
Vivi516g00005 1273 Gene3D - 425 514 IPR036388 -
Vivi516g00005 1273 Pfam NB-ARC domain 178 407 IPR002182 GO:0043531
Vivi516g00005 1273 Coils Coil 713 742 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi516g00005 598 764 WRKY Transcription Factor Family AT4G12020 32.768 2.25e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi516g00005 - - tpra:123915821 1583.54