Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi512g00018 | ATGAATAGAGAAATACAACAATTCCCAGTCTCATCTTCATCACATTTCCACCAACGTTTTCCAAAATCATTCTCTCTTCGTAGAAAAGTGCCATGGTGGTACCAAATACAACATCCACGTTCACCTTTCCTTGCAAAATGGAACGTAATATTCCTCTACTCCTGCCTCTTTGCTCTCTTTCTAGACCCTCTTTATTTCTATATTCCCATCACAGGAGACAAAGCATGCTTGGAAACCGATTTAGTCCTCGGTGTTTTCGTCACGCTATTACGTACCGTCGCTGATCTCTTCTTCTTCTTTCATATAATTCTTAAGTTTCGCACCGCGTTCAATTCTCCTACCTCTCGCGTATATGGCCGCAAAGAGCTTATCACCGATCCCGGTATGATTACCCGTCGATACCTCAGGCATGATTTCATCATTGACCTTCTTGCCTGCCTTCCTTTGCCTCAGATAGTTATTTGGATTGTGATTCCTGCAACAAAAAACTCGACCGCAGCTCATTCGAACCACACACTATCCCTAATAGTACTAATTCAGTACATTCCAAGACTGTTTCAGATTTTTCCTTTACAACGCAGAATCTTGAAGACTAGTGGGCTTATAGCGAAAACTGCTTTGGCAGGTGCATTGTACAATCTCGGTTTCTACATGCTCGCCAGCCATGTTTTAGGAGCAACGTGGTATGTGACGTCGATTCAGAGACAATACGAGTGTTGGAGAATAATGTGCAAGAAGGAAATGAACAGAACACATTCACCTTCTTGTAATCCTTCTTTTCTTGATTGTAATACTCTTAATACCCGCGAGCGACAGGTTTGGTTTAGACGCACTCGAGTCCTCTCTGCTTGCGATGCACTCAATGATAGAAACCACTTTCAGTTCGGAATGTTTGCTGATGCTTTTACTGATCATGTCTCTTCCTCGCGATTCTTTCAAAAGTATTTTTATTGCCTCTGGTGGGGTTTGAAAAATCTCAGTTCATATGGACAAAATCTTCAAACTAGTACTTACAGCGGCGAAACGTTATTTTCAAGTTTCATATGCATAGCAGGCCTTATCCTCTTTGCACATCTCATTGGTAACATGCAGAATTATCTGCAATCTTCAACTGCAAGACTTGAAGAGTGGAGACTTAAACAAAAAGATACAGAAGAATGGATGAATCATCGCCAACTTCCACCAGAGCTACAAGAACGTGTTCGTCGTTTTGTTCAGTACAAATGGCTTGCCACGAGAGGTGTTGACGAAGAAGCCATTTTGAAAGCCTTGCCTATCGATCTTCGCCGCCAGATTCAGAGGCATCTCTGTCTTGACATTGTTCGCCGAGTACCGTTTTTTGGCCAAATGGATGATCAACTTCTCGATGCTATATGCGAACGTCTAGTTTCATCGCTGAACACGAAAAATTCATATCTAGCTAGAGAAGGTGATCCAGTTCGAGAGATGCTTTTCATCATCCGAGGAAGTATAGAGAGTTCTACAACAGACGGTGGTAGATCAGGATTCTTCAATTCAATCACCCTAAAACCAGGTGACTTCTGCGGTGAAGAATTGCTAACATGGGCTTTAACGCCCGACCCTAGTCTTAACCTTCCAGATTCAACAAGAACTGTCAAGACAATAACCGAAGTAGAAGCATTTGCACTTCGAGCAGACGATCTCAAATTCGTGTCGAGCCAATTTAAGCGTCTGCACAGCAAGAAACTGCAGCACGCTTTCAGATACTATTCGCATCAATGGAGAGCTTGGGGTGCGTCGTTTATACAAGCCGCTTGGAGGCGTCACCGGAAGAGAGAACTGGCAATGGAGTTGATGGAAAAGGAGAATCTGTATTATGAAAATGTTATGGAGATTGAGGGTTATGAAGGGAGTGGCGCAGGAGAGAGTTCTAATGCTAATCAGGGACAGAATTTCGGTGCTACATTTTTGGCTTCGAGATTCGCTGCAAACACAAAGAAAGGCGCAGTTAAGAAGGTTACAATAATCCCTGATGATACCAGTTTGAAAATGCCTAAGATGTTCAAGCCAACTGAGCCTGATTTCTCAACATTTCAAGAAGATTAA | 2067 | 0.4267 | MNREIQQFPVSSSSHFHQRFPKSFSLRRKVPWWYQIQHPRSPFLAKWNVIFLYSCLFALFLDPLYFYIPITGDKACLETDLVLGVFVTLLRTVADLFFFFHIILKFRTAFNSPTSRVYGRKELITDPGMITRRYLRHDFIIDLLACLPLPQIVIWIVIPATKNSTAAHSNHTLSLIVLIQYIPRLFQIFPLQRRILKTSGLIAKTALAGALYNLGFYMLASHVLGATWYVTSIQRQYECWRIMCKKEMNRTHSPSCNPSFLDCNTLNTRERQVWFRRTRVLSACDALNDRNHFQFGMFADAFTDHVSSSRFFQKYFYCLWWGLKNLSSYGQNLQTSTYSGETLFSSFICIAGLILFAHLIGNMQNYLQSSTARLEEWRLKQKDTEEWMNHRQLPPELQERVRRFVQYKWLATRGVDEEAILKALPIDLRRQIQRHLCLDIVRRVPFFGQMDDQLLDAICERLVSSLNTKNSYLAREGDPVREMLFIIRGSIESSTTDGGRSGFFNSITLKPGDFCGEELLTWALTPDPSLNLPDSTRTVKTITEVEAFALRADDLKFVSSQFKRLHSKKLQHAFRYYSHQWRAWGASFIQAAWRRHRKRELAMELMEKENLYYENVMEIEGYEGSGAGESSNANQGQNFGATFLASRFAANTKKGAVKKVTIIPDDTSLKMPKMFKPTEPDFSTFQED | 688 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi512g00018 | 688 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 23 | 682 | - | - | |
| Vivi512g00018 | 688 | Pfam | Ion transport protein | 47 | 373 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
| Vivi512g00018 | 688 | SUPERFAMILY | Voltage-gated potassium channels | 39 | 368 | - | - | |
| Vivi512g00018 | 688 | FunFam | Cyclic nucleotide-gated ion channel 1 | 444 | 562 | - | - | |
| Vivi512g00018 | 688 | Gene3D | - | 49 | 370 | - | - | |
| Vivi512g00018 | 688 | Gene3D | Helix hairpin bin | 372 | 437 | - | - | |
| Vivi512g00018 | 688 | FunFam | Cyclic nucleotide-gated ion channel 1 | 373 | 437 | - | - | |
| Vivi512g00018 | 688 | CDD | CAP_ED | 446 | 577 | IPR000595 | - | |
| Vivi512g00018 | 688 | Gene3D | Jelly Rolls | 444 | 564 | IPR014710 | - | |
| Vivi512g00018 | 688 | SMART | cnmp_10 | 446 | 577 | IPR000595 | - |
Showing 1 to 10 of 13 entries
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi512g00018 | K05391 | - | gmx:100783672 | 1182.93 |
Showing 1 to 1 of 1 entries