Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi512g00002 ATGGCTTTGCAGTACTCAAAACAGCTGCTGCTGCTGCTGCTGGTTGGTGTTGCTGTCTTTCATACAAAAGCAGCTAATCAACCGATGTCACGTCCAAACTGTCCAACAATGTGCGGCTCAGTCACCATTCCTTTTCCATTTGGAACCACCAAGGATTGTTCCCTAGACAACACATTTCTCATCAACTGCAACAAAACATTTTCAACTACATCAAATTCAACAGCACTTGTACCTTTCTTGCCAAACACTAAACAAAGGGTCCTAAATATCTCACTTGATGGTGAACTGCGCGTTGCATGGCCAGTAGCCAGCGATTGCTACACTAAAAACAGTACACTCGTGGACCAAACAATTCAGGATATCAAAATGACTTATTTTCCCGTCTCGCCAAGTCGAAACAAGTTGATAGCGGTTGGCTGTGACGCATTTGGAGTATTCTTTGCATTGGATTCTGGTGGAGAACATTACACCAGTGGATGTGTGGCTTTGTGTGACAGGCTTCATGATATTGGCGCCAATGAATCTTGTTCTGGCACTGGCTGTTGCGAGGTTTCAATACCCCACGGTCATGTGTTTAAGGATGTAGTCTATGCAACTCAAAGCATATTCCACAATCCGTCGTTAGTGCATAACTTCAATCCATGTGGTTATACGTTTTTGGTTGAAAATGGAGGATACAAGTTTGCAAACAAAGACCTCCTCAGGTTGGAGAAGAAGGAGTTTCCAGTGGTGTTGGATTGGGCAATAGGGAACCAAACGTGCCAGCAAGCTCAGAAGGATCTTTCAAGTTATGCATGTAAGGCTGACAAAAGTACATGTCACCATGCACAAACCTACAAATCCGGTTACCTTTGCAAATGCCTTAATGGATACCGGGGAAATCCTTACCTCAATCATGGTTGCCTAGATGTTAATGAATGCATGGAATCCAATGATTGTGTTAAGGGAGCAAGATGCAAAAATCTTCATGGAAGCTATCAGTGTAAATGCCCAGCAGGATATGAGGGAGACGGGAAAAATAATGGAACAAGATGCAGTCTCAAATCAAGAAAAGAGCTCATGTTGATCATTGCATTGAGTGTCAGTGTAAGCGTTGTAGGACTACTAATGGGAAGCATTTATGCACATTGGGCATTGAAGAAAATAAAGCTCATCAAACTTAAAGAACAGTTTTTTCAACAAAACGGTGGCTTACTCTTACAACAACAGCTAGTGAAGCACGGAGGATCAGTAGAAGCAACTAAAGTCTTCACTGCTGAGGAGCTAAATAAAGCAACCAACAACTTCGATGAAGAAAATATCATAGGCCAAGGTGGTCAGGGAACAGTTTACAAGGGAGTTTTACAGGATAACAGAACCGTAGCAATAAAGAAGTCCAAAATCAATGATCCAAGCCAGGTTGAACCGTTCATCAATGAAGTGATCCTGCTTTCTCAAATCAACCATAGAAATGTGGTAAAACTCTTGGGCTGTTGCTTAGAGACAGAAGTTCCCTTGCTTGTTTATGAATTTGTTTCGAATGGTACTGTTTACGAGCATCTTCATGATCTAAGTCAATCCTTAAAGCTTACATGGAAAACAAGACTAAGAATAGCGAAAGAAACTGCTGGAGTCCTGGCATACTTGCATTCTGCTGCTTCAACACCAATCATACATAGAGATGTGAAATCTACAAATATACTCCTAGATGAGAATCTCACTGCAAAGGTTTCTGACTTTGGAGCTTCGAGGATAGTTCCTCTTGATAAAACTCAGATAACCACTCTAGTGCAGGGGACAATGGGGTATCTTGATCCAGAATACTTCCAAACAAGCCAGTTAACAGAGAAGAGTGATGTCTACAGCTTCGGGGTTGTCTTAGCAGAGCTGCTGACAGGAAAGAAAGCACTGTGTTTTGGCAGGCCAGAGGTAGGTAGAAACCTTGCACTGTACTTTGTTTCTTCAATGAAAGAAGGTTTGTTATTTCATATTCTGGACAAAAATATCGATGAGCCAAATGTTGAGCACCTTAAGGAAGTTGCCCTAATTGCAGAGAGGTGCTTAAGGGTGAAGAGTGAGGAAAGACCGACCATGAAAGAAGTGGCAATGGGACTAGAAGGAATATTGGTTATTGAAGAGCAGTGTTGGGGAAGTGACAATTTGCCTTCGGAAGAGACTGAAAACATGCTCAACGTAGCATCATCTGTTATCAATGTTGAAGATTGCGTTGGCGGAAGTGGAATTAATTCTTCGGACTCATATAGCATAAACCAGATTTCGATGTCAGTGATCGGTGGAAGATGA 2283 0.4201 MALQYSKQLLLLLLVGVAVFHTKAANQPMSRPNCPTMCGSVTIPFPFGTTKDCSLDNTFLINCNKTFSTTSNSTALVPFLPNTKQRVLNISLDGELRVAWPVASDCYTKNSTLVDQTIQDIKMTYFPVSPSRNKLIAVGCDAFGVFFALDSGGEHYTSGCVALCDRLHDIGANESCSGTGCCEVSIPHGHVFKDVVYATQSIFHNPSLVHNFNPCGYTFLVENGGYKFANKDLLRLEKKEFPVVLDWAIGNQTCQQAQKDLSSYACKADKSTCHHAQTYKSGYLCKCLNGYRGNPYLNHGCLDVNECMESNDCVKGARCKNLHGSYQCKCPAGYEGDGKNNGTRCSLKSRKELMLIIALSVSVSVVGLLMGSIYAHWALKKIKLIKLKEQFFQQNGGLLLQQQLVKHGGSVEATKVFTAEELNKATNNFDEENIIGQGGQGTVYKGVLQDNRTVAIKKSKINDPSQVEPFINEVILLSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTVYEHLHDLSQSLKLTWKTRLRIAKETAGVLAYLHSAASTPIIHRDVKSTNILLDENLTAKVSDFGASRIVPLDKTQITTLVQGTMGYLDPEYFQTSQLTEKSDVYSFGVVLAELLTGKKALCFGRPEVGRNLALYFVSSMKEGLLFHILDKNIDEPNVEHLKEVALIAERCLRVKSEERPTMKEVAMGLEGILVIEEQCWGSDNLPSEETENMLNVASSVINVEDCVGGSGINSSDSYSINQISMSVIGGR 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi512g00002 760 Pfam Protein kinase domain 430 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi512g00002 760 FunFam Wall-associated receptor kinase 2 505 721 - -
Vivi512g00002 760 CDD EGF_CA 303 337 - -
Vivi512g00002 760 SMART serkin_6 429 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi512g00002 760 FunFam Fibrillin 2 298 341 - -
Vivi512g00002 760 FunFam Wall-associated receptor kinase 2 399 504 - -
Vivi512g00002 760 SUPERFAMILY Protein kinase-like (PK-like) 413 702 IPR011009 -
Vivi512g00002 760 SMART egf_5 306 346 IPR000742 -
Vivi512g00002 760 SMART egf_5 265 302 IPR000742 -
Vivi512g00002 760 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 319 330 IPR000152 -
Vivi512g00002 760 ProSitePatterns Serine/Threonine protein kinases active-site signature. 550 562 IPR008271 GO:0004672|GO:0006468
Vivi512g00002 760 Gene3D Laminin 252 345 - -
Vivi512g00002 760 SUPERFAMILY EGF/Laminin 303 340 - -
Vivi512g00002 760 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 702 IPR045274 GO:0007166
Vivi512g00002 760 Gene3D Phosphorylase Kinase; domain 1 404 504 - -
Vivi512g00002 760 ProSiteProfiles Protein kinase domain profile. 429 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi512g00002 760 Pfam Calcium-binding EGF domain 303 345 IPR001881 GO:0005509
Vivi512g00002 760 SUPERFAMILY Growth factor receptor domain 249 345 IPR009030 -
Vivi512g00002 760 CDD STKc_IRAK 435 701 - -
Vivi512g00002 760 Pfam Wall-associated receptor kinase galacturonan-binding 34 97 IPR025287 GO:0030247
Vivi512g00002 760 ProSitePatterns Calcium-binding EGF-like domain signature. 303 328 IPR018097 GO:0005509
Vivi512g00002 760 Gene3D Transferase(Phosphotransferase) domain 1 505 713 - -
Vivi512g00002 760 ProSiteProfiles EGF-like domain profile. 303 346 IPR000742 -
Vivi512g00002 760 SMART egfca_6 303 346 IPR001881 GO:0005509
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi512g00002 9 725 Receptor kinase-like Gene Family AT1G21230 45.873 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Vivi512g00002 Pkinase 2.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi512g00002 - - mtr:25489730 1051.97