Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi512g00001 ATGGTTGTGCACATAAAACAGTTGCTGCAGATGATGGTGGCTGCTGTCATTTATTCAGAAGCAGCTCAACCAGAGTCACTACCAAACTGCCCAACAATGTGCGGTTCGGTCACCATTCCTTATCCATTTGGAATCACCGAGGATTGTTCTTTAGACAACACATTTCTCATCAATTGCAATAAAACATCTTCAACCACAACACATGTACCATTTTTGCCACAGAGCAATCAACGAGTTATAAACATCTCACTCGATGGTGTGCTGCGTGTTGCATGGCCAGTAGCCAGCGACTGCTACACTGAAAACGGTACACTTTTGAACAAAACAAGTTCGGCTATTAACATGACATATTTTCCCGCCTTGCCTACTCGAAACAAAATGATAGCAGTTGGTTGTGACACGTTTGGAGTATTCACAGCAAATGATTCTGGGGGAAACGGCTACATGGCAGGATGTGTGGCTTACTGCAAGAGCCTTGATGATGTCGTGGAGAATGATCAATCTTGCTCCGGCACTGGCTGTTGCGAGGTTTTAATACCCCGAGGTCATGCGTTTACGGAAGTAAGTTATGGTACTTCAGGCATAACGAAAAATCACACGTTAGTACACGACTTCAATCCATGTGGGTATGCGTTTGTGGTTGAAAATGGAACCTACAGCTTTAACTCCACAGACCTCAAGTTGGAGAAGAAGGAGTTTCCAGTGTTGTTGGATTGGGCAATAGGGAACCAAACGTGCGAACAAGCTCAGAAGAATCTTTCAAGTTATGCATGTAAGGCTGACAAAAGTACATGTCACAATTCAACGGGGAGATCTGGTTACCTTTGTAGATGTATTGATGGATATTATGGAAATCCTTACTTCAATGATGGTTGCAAAGATATTGATGAATGCAAGGTACCCAATGATTGTGTTAAGGGAGCAACTTGCAATAATAATCCACCAGGAAGCTATAGTTGTAAATGCCCGGCAGGATATGAGGGAGACGGGAAAAATAATGGAACAAGATGCAGTCACAAATCAAGAGAAGAGCTCATGTCGATCATTGCATTGTGTGTAAGCGTAACTCTCGTAGCTCTACTGGTTGGGAGCTTATATGCCTATTTGGCATTGAAAAAAAGAAAGCTCATTAAACTTAAAGTACATTTTTTTCGACAAAACGGTGGTTTACTATTACAACAACAAATAGAGAGGCATAGAGGATCCAGTGAAACAGCTAAAGTCTTCACTGTTGAGGAGCTAAATGAAGCAACCAACAACTTTCATGAAAGCAGGATCTTAGGCCAAGGTGGTCAAGGAACAGTTTACAAAGGAGTTTTACAAGATAAAAGAATTGTAGCAATAAAAAAGTCCAAAATCAATGACCCAAAACAGATTGAGCCGTTCATCAATGAAGTGGTCATTCTTTCCAAAATCAACCATAGAAATGTGGTAAAACTCTTGGGTTGTTGTTTAGAGACAGAAGTTCCCTTGCTTGTTTATGAATTCATTCCCAATGGCACATTATATGAGCATCTTCATGATCAAAACCAATCTACAAAGCTTACATGGAAAACAAGATTAAGAATAGCAAAAGAAACAGCTGGTGTCCTAGCATACTTACATTCTGCAGCTTCTACGCCAGTCATACATAGAGATGTGAAGTCTACAAATATACTCCTAGATGACAATCTCACTGCAAAGGTTTCTGACTTTGGAGCTTCAAGGATTGTTCCTCTTGATCATACTCAGATAACCACTCTAGTGCAGGGGACATTGGGGTATCTTGACCCGGAATATTTCCACACAAGCCAATTAACAGATAAGAGTGACGTCTATAGCTTTGGGGTTGTCCTAGCAGAGCTATTGACAGGTAAGAAGGCATTCTCGTTTGCCAGGCCAGAGGAAGAAAGAAACCTTGCAATGTGCTTTGCTTCTTCAATTAAAGAGGGCCGGTTACTTGATATTTTGGACAGAAATATAAATGAGACAAATATTGAGAAATTAAAGGAAGTTGCGGATATTGCAGAGATGTGTTTAAGGGTGAAGGGTGAGGAAAGACCCACGATGAAAGAAGTGGCAATGGAATTAGAAGGAATATTTGTTATTGAAGAACACAATTGGGCAAGAGGCAACACGTCTTCAGAAGAGAATGAAAGCTTGCTGAAAGCAACATCATCCATAATCGATGTTGAAGATAGCATTGGCGGAAATGGCATTACTTCTTCTAATGCATATAGCACAAACGAAATTTCAATGTCGTTGATTGGTGGAAGATGA 2259 0.4073 MVVHIKQLLQMMVAAVIYSEAAQPESLPNCPTMCGSVTIPYPFGITEDCSLDNTFLINCNKTSSTTTHVPFLPQSNQRVINISLDGVLRVAWPVASDCYTENGTLLNKTSSAINMTYFPALPTRNKMIAVGCDTFGVFTANDSGGNGYMAGCVAYCKSLDDVVENDQSCSGTGCCEVLIPRGHAFTEVSYGTSGITKNHTLVHDFNPCGYAFVVENGTYSFNSTDLKLEKKEFPVLLDWAIGNQTCEQAQKNLSSYACKADKSTCHNSTGRSGYLCRCIDGYYGNPYFNDGCKDIDECKVPNDCVKGATCNNNPPGSYSCKCPAGYEGDGKNNGTRCSHKSREELMSIIALCVSVTLVALLVGSLYAYLALKKRKLIKLKVHFFRQNGGLLLQQQIERHRGSSETAKVFTVEELNEATNNFHESRILGQGGQGTVYKGVLQDKRIVAIKKSKINDPKQIEPFINEVVILSKINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYEHLHDQNQSTKLTWKTRLRIAKETAGVLAYLHSAASTPVIHRDVKSTNILLDDNLTAKVSDFGASRIVPLDHTQITTLVQGTLGYLDPEYFHTSQLTDKSDVYSFGVVLAELLTGKKAFSFARPEEERNLAMCFASSIKEGRLLDILDRNINETNIEKLKEVADIAEMCLRVKGEERPTMKEVAMELEGIFVIEEHNWARGNTSSEENESLLKATSSIIDVEDSIGGNGITSSNAYSTNEISMSLIGGR 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi512g00001 752 ProSitePatterns Serine/Threonine protein kinases active-site signature. 542 554 IPR008271 GO:0004672|GO:0006468
Vivi512g00001 752 ProSiteProfiles Protein kinase domain profile. 421 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi512g00001 752 Gene3D Laminin 243 337 - -
Vivi512g00001 752 SUPERFAMILY Protein kinase-like (PK-like) 404 690 IPR011009 -
Vivi512g00001 752 Gene3D Transferase(Phosphotransferase) domain 1 497 714 - -
Vivi512g00001 752 CDD STKc_IRAK 427 693 - -
Vivi512g00001 752 SUPERFAMILY EGF/Laminin 292 338 - -
Vivi512g00001 752 Gene3D Phosphorylase Kinase; domain 1 395 496 - -
Vivi512g00001 752 FunFam Wall-associated receptor kinase 2 391 496 - -
Vivi512g00001 752 SMART egfca_6 294 338 IPR001881 GO:0005509
Vivi512g00001 752 Pfam Wall-associated receptor kinase galacturonan-binding 30 86 IPR025287 GO:0030247
Vivi512g00001 752 ProSiteProfiles EGF-like domain profile. 294 338 IPR000742 -
Vivi512g00001 752 SMART egf_5 245 293 IPR000742 -
Vivi512g00001 752 SMART egf_5 297 338 IPR000742 -
Vivi512g00001 752 SMART serkin_6 421 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi512g00001 752 FunFam Fibrillin 2 289 333 - -
Vivi512g00001 752 Pfam Protein kinase domain 421 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi512g00001 752 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 21 694 IPR045274 GO:0007166
Vivi512g00001 752 CDD EGF_CA 294 329 - -
Vivi512g00001 752 Pfam Calcium-binding EGF domain 294 337 IPR001881 GO:0005509
Vivi512g00001 752 FunFam Wall-associated receptor kinase 2 497 713 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi512g00001 11 715 Receptor kinase-like Gene Family AT1G21250 45.931 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Vivi512g00001 Pkinase 7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi512g00001 - - mtr:25489730 988.793