Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi511g00007 ATGGCGTCGAAGCGAGAATTGGAAGAAAAAGACGGTGAAGATCTCGATTTTCTTTTACCTCCGCGTCAGGTCATAGGTCCTGACGAAAATGGAATCAAGAAGGTTATTGAGTACCAATTCGGTGATGATGGTAATAAGGTTAAGATCACGACAACCACTCGCATCCGAAAACTCGGCACCGCGCGTCTCAACAAATGCGCCGTCGAACGCCGTTCGTGGCTGAAGTTTGGAGATGCCGTTGAAGAAGATGATGATGCATGCCTCACGATGGTTTCCACGGAAGAAATCATACTGGAACGCCCCAAACCTGTTGGTTCCAGCAAGGAGGGTGCAAAGAATATTGTCACATCTGCTCTGTTCAAGTTCAATGAAGGTGCTGTTTATATGGTATGCACGGCTTGTGGGAAGAACGCTGATCATTGGAGTGAAAGCTGTCCATATATATCTGTTGAAAGGTTTGTTGATATACCTCCAAGGCTAGTAGATGAGCCATACCTGAGTTGGAGGAACTATAAGAATTCTCTTCGGGTAACCAACCTCTCGGAGGACACAAGCGAGGGTGATTTGTTTGAGCTTTTCAGTTACTTTGGTACAGTGGTCAGGGTCTATGTTGACATAGATCAAGAGACTGGCATTTGTAGAGGCTTTGGCTTTTTTAACTTTGTCAGCAGGGAATATTCTCAGAGGGCTATTAACAAACTCAACGGATATGGCTACGATAGTCTCATTCTGAGAGTTGAATGGGCCACCCCTACCTAG 759 0.4559 MASKRELEEKDGEDLDFLLPPRQVIGPDENGIKKVIEYQFGDDGNKVKITTTTRIRKLGTARLNKCAVERRSWLKFGDAVEEDDDACLTMVSTEEIILERPKPVGSSKEGAKNIVTSALFKFNEGAVYMVCTACGKNADHWSESCPYISVERFVDIPPRLVDEPYLSWRNYKNSLRVTNLSEDTSEGDLFELFSYFGTVVRVYVDIDQETGICRGFGFFNFVSREYSQRAINKLNGYGYDSLILRVEWATPT 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi511g00007 252 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 4 252 IPR017334 GO:0003743|GO:0005737|GO:0005852
Vivi511g00007 252 SUPERFAMILY RNA-binding domain, RBD 166 251 IPR035979 GO:0003676
Vivi511g00007 252 CDD RRM_eIF3G_like 174 249 IPR034240 -
Vivi511g00007 252 PIRSF Transl_init_eIF-3_RNA-bind 1 153 IPR017334 GO:0003743|GO:0005737|GO:0005852
Vivi511g00007 252 PIRSF Transl_init_eIF-3_RNA-bind 156 252 IPR017334 GO:0003743|GO:0005737|GO:0005852
Vivi511g00007 252 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 175 240 IPR000504 GO:0003723
Vivi511g00007 252 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 169 250 - -
Vivi511g00007 252 SMART rrm1_1 174 247 IPR000504 GO:0003723
Vivi511g00007 252 Gene3D - 169 252 IPR012677 -
Vivi511g00007 252 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 173 251 IPR000504 GO:0003723
Vivi511g00007 252 Pfam Eukaryotic translation initiation factor 3 subunit G 23 148 IPR024675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi511g00007 8 251 Eukaryotic Initiation Factors Gene Family AT3G11400 51.155 3.05e-94 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi511g00007 K03248 - gmx:100818725 311.997